K01239

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01239

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01239

Determination of introduced cDNA(s)

  • J013043H11 - Rice Full-length cDNAs - Original: J013043H11

    full reading [+] show sequence

    Nucleotide sequence: J013043H11 - full reading 
    GAAACTCGTA AACCTCTCCC TCTCCCCACT CTCGCGCCTC CTCCCATGGC 
    TTCCTTCCCG ACCACCGCCG CCGCCGCCGC CGCGCAGGCA TTCGCCTTCG 
    CCCTCGCGCC GAAGCCATCC TCCTCCGCCG CCGCACCATC CGCGCTCTTC 
    CCCCGCACCG CCGCGGCGGT GGCGTTCCCG ACGCTGGCTG TGCGAGGAAG 
    CGGGAAGGCG AGGCAGCCGG TGGTGGCCGC GGCGGCGGGG GCGGGGACGG 
    GGAGCGAGCA GAGGGAGACG ATACTGCTCC CCGGGTGCGA CTACAACCAC 
    TGGCTGATCG TGATGGAGTT CCCCAAGGAC CCCGCCCCGA CGCGGGAGCA 
    GATGATCGAC ACCTACCTCA ACACCCTCGC CACCGTCCTT GGCAGCATGG 
    AGGAAGCCAA GAAGAACATG TATGCCTTCA GCACAACCAC CTACACTGGT 
    TTCCAGTGCA CTGTCGACGA GGAAACATCA GAGAAGTTCA AGGGTTTACC 
    CGGCGTTCTG TGGGTGCTTC CTGATTCCTA CATCGATGTC AAGAACAAAG 
    ACTACGGGGG TGATAAATAC ATAAACGGAG AGATAATTCC ATGCACTTAC 
    CCAACCTACC AACCAAAAGA GCGGAGGACA TCCAAATATG AAAGCAGACG 
    GTATGAAAGG CGAAGAGATG GACCCCCAGC AAGCAGGAGA CCAAGGCCGC 
    AGACTGCTCA GCCTGAGTCA GCCTCTTCTT CATGAGGTCA GTTTTGCAGG 
    CACTCATCCA CGTAATGGAA AGAAAGAACT TGCTTACTAG CTAATTCTAC 
    CACTTGGCGT CGCATACGGG AAAGCTCTGA CAGACAAATC TATCCTCAAC 
    CCAAAATATC ATCCAGAGCT GTGCAAGCGA TTCATGCAGG CTGCATTTGG 
    AATTTTGGAT CATGTGGATC ATCATCATTC TTGATATTTT GGGTGGACTA 
    TGACCTCTGA ATGTGACAAA AGACGGAAAT TCTGATCTAT CTAAGAATGT 
    TACTGTCTCA AATATCTAGT GATATTTTTC TTGTGTTACC CTGCTACCTA 
    GTAGTTGTGT TGCTGGTTTG TGTGTGGAAT TTCTTGATCC TTATCCATGT 
    GAGTTTTCTT GAACTGAGGT TGATTTTTTG GCCTTTGTAT TGGCATTTGT 
    TCTGCTCAGA GCCTGAGACT TGCAATTTGG GATGACCATT GAATCGAAGT 
    GAGATT

    Gene models with high sequence identity

    1. AT1G11430.1 [+] show detail - plastid developmental protein DAG, putative
      E-value: 2e-70; Score: 263.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G11430.1

    Model type
    Protein coding
    Short Description
    plastid developmental protein DAG, putative
    Computational Description
    plastid developmental protein DAG, putative; LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 252 Blast hits to 229 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 252; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR