K01305

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	whole plant (PO:0000003)	decreased height (PATO:0000569) (Adult plant::Plant height::short)
	rosette leaf (PO:0000014)	increased size (PATO:0000586) (Rosette leaf::Shape::large) dark green (PATO:0001249) (Rosette leaf::Color::dark)
	fruit (PO:0009001)	decreased length (PATO:0000574) (Silique::Shape::short)
	stem (PO:0009047)	abnormal (PATO:0000460) (Stem::Shape::zigzag) abnormal (PATO:0000460) (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01305

Determination of introduced cDNA(s)

J023056O15 - Rice Full-length cDNAs - Original: J023056O15

full reading [+] show sequence

GGGAGGGGTT GTTTGTCTCT AATCGCTCTC GTTCCCCATT TCGCTTTGGA 
GGCGGCGACG GCGAGAGGCG AGAGGAGATG GCGGCGGCGC GGGGGCAGAA 
GGCGGTGGCG GCGCTGCCGC ATCTGGTGAA ATCGCTGCGC AGCGAGCCCG 
TCTCCAACGC CCCGAGGCTC CGGCACCTCC CGTCCCTCAG GAGGACCTTC 
TCTCTCTACG ATCAGATCAA CCTCATCGAT AGCGTCCCCG AAGACCGGCT 
CCGATTCCAA TCATATGATG ACACCGGATT CAATATAACA AAGTAAAGTA 
TGAAGGAAGC TTGTTGATAG TAGAAAACAA GATAATGACA TGGGCACCCA 
AATCATTTGC AGAGATAACA GCTGAAAGTT TATCAATCTT CAAAGTAGTG 
CACCCTATCC CAGGTAATTC TGCTATTGGT CAACATTTTT AGGCATTTTA 
TCTTAGGCAA CATATCCTAT GCACATAGGC CCTCACGTGT ACACACGTGC 
ACACCAACTA AAAAATGTCA CCAAAAAATC TAGAAAAAAT CATACACATA 
CTTTCAATTG TATTACACCT AGGGTTAAAA TCTTAACGTC AAATTCATTA 
TATTTTAGCC GTAACAAAAA AAACAAAAAA TCTGACAGTT TTAAGGTTGC 
AATTTTGTCA GAATTTTATC TTTTTTGTTA TTCTCTATGT AGAATGAATT 
TGAATATGCG ACTTTGCACG TAGATGTAAT ACTATTGAAA GTACATGTAT 
GAATTTTCCT AGAATTTTTT GTGATAATTT TTAGTTGGTG TACACGGTGT 
GTACACGCGA GGGCCTGTGT GCATAGGATA CGCTCCCTTT ATCTTGATTG 
GACTTAGCCA TTCTGTCACC CATGTTTGAA ATGTCCATAT GGCTGTTTTT 
CTTTTAAAAA TCAATCTCAT GGTGCAGCTT CATTAGGAAG CTAAAACAGG 
CATTGGCTGT TTATCAATCT ACAAAGCTGT GCACTGAATT GGTGCACAAA 
TATTTTTAAG AATTTCAGGG TAGAACACAG TCAATGCAAA CCTTCCTTGA 
ATTAACTGAA TAGTTTAATT GTCCAAGCAT CTTTCTCCTA CTGGGGCTCA 
AGATGTGTTC CAGGATATTG CACCCTCATG GTTGAGTAGT TTTTTGTATT 
TCTGATTCAA AAGCACCGTT TGTGGGTTGA CATCATTTTG TGTGCCATGC 
TTCTCCAGAG ATTCTGATTC TTGGTTGTGG TAGACACATC CAACCAATCA 
GTCCTGAGCT CCGCAAATTC ATTCGGTCAA CTGGGATGAA GCTGGAAGCA 
GTTGATTCGG TAAAAGACCA AATGTTCCTT ATTTACAACA TCATCACTTG 
TGTTTGTAAA CTTCAATGTA GCAGATATTT GTAGTTTGTT CTCTACCTAC 
AATGTTTAGT CTTTTGCACA TGTCTAATCC TTCTGTTGTA TGGCAGAGGA 
ATGCGGCTTC AACATATAAC ATTCTGAATG AAGAGGGGAG GCCAGTCGCG 
GCTGCACTTC TTCCTTGCGG AGTCACTTCT TGAAACACGA GTGTTACCTT 
TGTGGTGGTG AGCGTCTTCT CCTTCCAGTC GATACTCGAT AGAGTTGAAA 
TGAAGCATAT TGTCGCATGG GAACACTGAA AATCTGTAAC ATTAACAAGT 
GCCGTTGCCC TGTCCTTTTC CTTTTCCCCA CCCAAGAACC CAACCCCCTA 
GGAGAGATCA CACCTTTGGT TTTGTGGGTT CTTCTCTTGT AATCGCGGGA 
GGACAAGGTT TTTGACCTAG TAGTATACAT CAGAATAACG AGTCTGAAAC 
AAGTTGATTG TCTTCTATAA CATCACACTC GGTTTTTTAC TACT

Gene models with high sequence identity

AT3G60150.1 [+] show detail - Protein of unknown function (DUF498/DUF598)
E-value: 2e-26; Score: 58.90

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Protein of unknown function DUF498	0.0000024
HMMPfam	Protein of unknown function DUF498	0.0000087
HMMPfam	Protein of unknown function DUF498	0.000000018
HMMPanther	Protein of unknown function DUF498	0.00000035
HMMPanther	Protein of unknown function DUF498	0.0000021

See the detailed result >

AT3G60150.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF498/DUF598)
Computational Description: Protein of unknown function (DUF498/DUF598); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF498 (InterPro:IPR007523); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF498/DUF598) (TAIR:AT2G44525.1); Has 753 Blast hits to 753 proteins in 341 species: Archae - 0; Bacteria - 405; Metazoa - 118; Fungi - 87; Plants - 61; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Link: InterPro Scan - TAIR