K01335

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01335

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • dark green (PATO:0001249)
    (Rosette leaf::Color::dark)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
stem (PO:0009047)
  • increased thickness (PATO:0000591)
    (Stem::Shape::thick)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01335

Determination of introduced cDNA(s)

  • J013091L24 - Rice Full-length cDNAs - Original: J013091L24

    full reading [+] show sequence

    Nucleotide sequence: J013091L24 - full reading 
    TAGTCTCCAC TCCTGCATCA CCTCACCACC ATGGCTCAGC TCCTCTCCTC 
    CTCCGCTCCT CCCCGCCTCC ATCTCGCCGC CACGCCAGCT TGCTTCTCCT 
    CCTCTTCAGG CCATGGCGTC TCCCGCTTGT CCGTGACGTC AGCATGCTCT 
    GCCGCTCCCG GTAGCAGATT TCTTCTCGAT TTTTCTCTTT CTTTCGTGAT 
    TCCGTCCCCA TTTCTGGGCA TCTTGAGAGC TTAATTCTAT TGTTTCGAAC 
    GGGCAGGGTC GCTGGTGAGC ATGAGGAGGC AGAAGGCGAG GTCCCTGACC 
    GTCCGGTGCG AGCAGGGAGC CAAGGGCGGC GGCGGCGGCG GCGGCGGTGG 
    GCTGGACGTG TGGCTCAGCC GCGGCGCCAT GCTCGGCTTC GTCGCCGCCA 
    TCACCGTCGA GCTGACCACC GGCAAAGGCG TGCTCCAGGT TTAGCTCCTC 
    TGCAAAATTC ATTCTAACCT GTGAAAAAAA TTCTCTGAAG AATTTCGCCG 
    TTGAATGTTT GGTCTCTCCG ATCCTGCGCC GCAGAACGTG GGGCTGACGT 
    CGCCGGTGCC GACGGTGGCG CTGGCGCTCA CCGGGGTGGT CGGCGTCGCC 
    ACCGCGTTCC TCATCTTCCA GTCGGCGTCG CAGGACTGAT CGGACGATCG 
    CCGCCGACGA CGCAGCTTCT TGCTGCTTAC CAATGGGCCA ATGGCGTCAC 
    TCCATTGGTC TCCGTGTTCT TGGTGCGTTT TGCGTGATGC GTGTGTGTGG 
    GGAGATGTGT TTCATAGGGA GGGGTCAAAC TGTACCGGTG TTAAAATTAT 
    AGAGATCTTT CTTGTTCAGA AATTACTATT ATTATAGTAC TACCTCTGTT 
    TTCGTTTCCA AATAAATGAC GTTGTTTAGT GCC

    Gene models with high sequence identity

    1. AT4G34190.1 [+] show detail - stress enhanced protein 1
      E-value: 0.0000003; Score: 52.80

     

    InterPro Scan Digest

    See the detailed result >

    AT4G34190.1

    Model type
    Protein coding
    Short Description
    stress enhanced protein 1
    Curator Summary
    Encodes a stress enhanced protein that localizes to the thylakoid membrane and whose mRNA is upregulated in response to high light intensity. It may be involved in chlorophyll binding.
    Computational Description
    stress enhanced protein 1 (SEP1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR