K01401

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01401

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01401

Determination of introduced cDNA(s)

  • J013000P23 - Rice Full-length cDNAs - Original: J013000P23

    full reading [+] show sequence

    Nucleotide sequence: J013000P23 - full reading 
    GTCTGGTCTC CACCCTCCCT TTCTCTCTCT AGTCCTCTAG AGCCGAGGGT 
    TGCTGCGAGG AAAGCGTAGG AGAGAGGGTT GCTGGCTGCA GCCCCGGCGA 
    GAAGCGCCAT TGTTGTCGTC GTTGGGCCAA GAACCAAGAA ACCAAGAAGA 
    CAAGAGGAGG AGGAGGGGGG AAGAAGACGG AAGAGAGAGA GGAAGAGGCA 
    CTGGATAGGT GCATCCTTTG CCTCTAGCCG CTTTCTCTTT CTCCTTCCTG 
    GAGGGGGGAG AGAGAGAGAG GAGTGGGAGA GGAAAGGAGA GTAGATGGGC 
    GAGATGGTCT TGGCCGGGTA TGGCATGGAC AAGGCGGTGA GGAGCAGCGT 
    CAGCTTCGAG ACGCCGTGCG GCAGGCTGCT GCGCGAGCTC GAGCAAATAT 
    GGACTGAGAT TGGGGAGCGC GAAGAAGATA AAGATCGCAT GTTCTTAGAA 
    CTTGAAACAG AGTGCATGCG TGTGTACCGT CGAAAGGTTG ATAGTGCCAA 
    TGCTGAGAGA TCCCAGCTCC GTCAGTCATT GATGGCCAAA GAAGCAGAGC 
    TTAAAGTTTT AGTGGCTTCA ATAGGTGAAA TTACCCCAAA ATTTAAGGTG 
    GATGAAAAGC AATCATTGAA AGAGCAACTT GCCAAAGTGA CGCCTCTACT 
    GGAAGATCTC AGGTCAAAGA AAGAAGAAAG AATAAAACAA TTCTCACTTG 
    TCCAATCTCA AATCGAGAAG ATAAAAGCAC AAATTTCGGA TCACAATAAT 
    CAGCATGACA ATGGTCCGGT CAATCATTCC AAGGACAATC ATGATTTGTC 
    AACCAGAAGG CTTTCTGATC TTCAAGCGGA GCTTCGCAAT TTACAGAAAG 
    AGAAGTCTGA TCGCCTTCAG AAGGTCTTCA TATACGTCGA TGAAGTGCAC 
    TGCCTATGCT CTGTGCTTGG GATGGATTTT GCAAAGACAG TTAAAGATGT 
    GCATCCAAGT TTACATGGGG CCAACTCAGA AAATTCAACG AATATCAGTG 
    ATAGCACTCT TGAAGGTCTT ACTGAGACCA TCCTTAAGCT CAAAGCAGAA 
    AAGAGGACTA GAGTTTCGAA GTTGCAAGAA ATCGTCGGAA AGCTCCACAA 
    GTTATGGAAT TTGATGGAGT CAACTGAACA AGAGAGGAGA CATTTCACCA 
    GAGTAGCTGC TGTTCTTGGA TCTACTGAGG AAGAGATCAC TTCATCTAGT 
    GTCCTGTCGC TGGAGACAAT TCAGGAGACA GAAGAGGAAG TTGAGAGACT 
    AACTAAACAA AAGGCAAGTA GAATGAAGGA GCTTGTTCTT AAGAAAAGGT 
    TAGAGCTAGA AGATATCTGC AGTAATGCGC ATATGGAGCC TGATATGAGC 
    ACAGCACCTG AGAAGATAAC CGCATTGATT GATTCTGGTC TAGTGGATCC 
    TTGTGAACTT CTTTCCAGCA TTGAAACACA AATAGCAAAA GCGAGGGAGG 
    AGTCCCTAAC CAGGAAAGAT ATCATGGAGA AAGTAGACAG ATGGCTATCA 
    GCTTGTGATG AAGAAACTTG GCTTGAGGAA TATAACCAAG ATAGTAGCAG 
    GTATAGTGCT GGTAGGGGTG CCCATATAAA TCTCAAGCGT GCAGAGAAGG 
    CAAGGATACT TGTTCAAAAA ATACCATCAA TGATTGACAA CTTGATAGCT 
    AAAACATTTG CGTGGGAGGA TGAAAGAAGT GTGCCATTTT TATATGATGG 
    AGCCCGTCTT GTTGCCATTT TGGAGGAGCA AAAACTCAGA AGGGTACAAA 
    AGGAAGAAGA CAAGAGACGA CACCGGGACC AGAAGAAACT GCAAAGCTTA 
    TTGCTTAAGG AGAAAGAGTT GATTTTCGGC TCCAAACCTA GTCCAAAAAA 
    GACAAGCAGC TTTAATAGGA GGACGAGCAG CCATCACCCG AATGGAAATG 
    GAGCTGGGTT CATGACCCCG GTGCCCCGTA GAGTTTCTGC AGGCAGTGCC 
    ACTCCTGAGC TTCTAACTCC ACGCTCATAT TCTGGACGGT ACAATAATTA 
    CTTCAAAGAG AACAGGAGGC TGGCTGCTGC ACCACTGAAC TTCTCAACGG 
    TTTCGAAGGA GGATAGTATG TCATCCTTTG CCTCCATCAG CGGCTCAGAA 
    CCTGATTCTC CTTTGGTTTT GCACTGAGAT CCCATCGTTC GATTGGACAT 
    TTTCGAGAAT GTCACAGTTG ATCTTTTGAG GTTCTGATAA TCCTGATTTC 
    CAAATGCTGC ATTTCTGGTT AGGGATGAGA GACTTCTCAG CAAGAAGGAT 
    GGTAGTGAAG ACTATCCACG ACATTGGGCC ATTGTGTGTT AACTGGTTGA 
    CATTGCTAAT GAGTGACGAC AGGTTGTGAC AGGATTTAGA TAAGATTTGC 
    CTGTAGATAT ATGACCTAAC ATCTGCGGTG CTGTTGTACC TAAATTACGT 
    CGATTGATCA GTGGGTTGGT TAGGAAGCAT GCCTAAGTTG TGCATTATAT 
    TCGTTTTCTT GGTATTCTTT GAGTTTTGTA TTTAGTCATT GTTTTGCATG 
    TGAAAAGGAG TTGGTGTTGA TTTGCAATCC AAAGGTGCTG TGTAATTTCA 
    TCCTGCAGAC TCAACCTGAG GCCTTTGATT TGTGTGCTGT ACTGCTATGG 
    AAATCGTAGT TCATACTTCA TTCAGGAAGG AAAGAAGAAA ACAAGGAGGG 
    AGCATACTAG TACATAATAA AGAGAAAGAA ACAGAATTAA ACATGGGAGG 
    AGCCCGAAGA AATAGCAATT GAGAAGACAG CCTTCCACCC ATCTAGGGCC 
    GGTCCATCTG CTTCTTTGAT GTAAAATTCA CGCACCTGAT GGTGGTTGAT 
    TATTGAAGAT AACGTTGTTT TTGTGATTCC AAATCCTCCA AAAAGCAGAG 
    GAGATAGAAG CTCTGATAAT CTTTCATTGC GATAGAAGCT CTGATAGTCT 
    TCAACTGAGG AAATATTTGG CCAGCACCCC TATTTTGGAC CAGAAAGAAG 
    CAAATTACCT TTTGCTGACG GAGGGAGTAC ATTTTACAAC ACCCTTGCTG 
    CATTTTGGTC TTCCAAAGAT ATAGGGAGGC CTGACATGTG TAAAGAACAA 
    GCCTGTGTAG TAGCTAAAAC GCCAGTGAAC AGCAGAACAG TAAACAACTT 
    GAGAATTACC CCTTTCTTAG CATGAAACGG CAACTCCAAG ATAAAGTTGA 
    CAC

    Gene models with high sequence identity

    1. AT2G01910.1 [+] show detail - Microtubule associated protein (MAP65/ASE1) family protein
      E-value: 1e-164; Score: 578.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Microtubule-associated protein, MAP65/ASE1-type 4.80000000000003e-60
    HMMPanther Microtubule-associated protein, MAP65/ASE1-type 4.69998262512756e-109

    See the detailed result >

    AT2G01910.1

    Model type
    Protein coding
    Short Description
    Microtubule associated protein (MAP65/ASE1) family protein
    Curator Summary
    Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria.
    Computational Description
    ATMAP65-6; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-7 (TAIR:AT1G14690.2); Has 5922 Blast hits to 4912 proteins in 547 species: Archae - 118; Bacteria - 527; Metazoa - 2917; Fungi - 542; Plants - 628; Viruses - 11; Other Eukaryotes - 1179 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR