K01401

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01401

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01401

Determination of introduced cDNA(s)

  • J013000P23 - Rice Full-length cDNAs - Original: J013000P23

    full reading [+] show sequence

    Nucleotide sequence: J013000P23 - full reading
    GTCTGGTCTC CACCCTCCCT TTCTCTCTCT AGTCCTCTAG AGCCGAGGGT 
    TGCTGCGAGG AAAGCGTAGG AGAGAGGGTT GCTGGCTGCA GCCCCGGCGA
    GAAGCGCCAT TGTTGTCGTC GTTGGGCCAA GAACCAAGAA ACCAAGAAGA
    CAAGAGGAGG AGGAGGGGGG AAGAAGACGG AAGAGAGAGA GGAAGAGGCA
    CTGGATAGGT GCATCCTTTG CCTCTAGCCG CTTTCTCTTT CTCCTTCCTG
    GAGGGGGGAG AGAGAGAGAG GAGTGGGAGA GGAAAGGAGA GTAGATGGGC
    GAGATGGTCT TGGCCGGGTA TGGCATGGAC AAGGCGGTGA GGAGCAGCGT
    CAGCTTCGAG ACGCCGTGCG GCAGGCTGCT GCGCGAGCTC GAGCAAATAT
    GGACTGAGAT TGGGGAGCGC GAAGAAGATA AAGATCGCAT GTTCTTAGAA
    CTTGAAACAG AGTGCATGCG TGTGTACCGT CGAAAGGTTG ATAGTGCCAA
    TGCTGAGAGA TCCCAGCTCC GTCAGTCATT GATGGCCAAA GAAGCAGAGC
    TTAAAGTTTT AGTGGCTTCA ATAGGTGAAA TTACCCCAAA ATTTAAGGTG
    GATGAAAAGC AATCATTGAA AGAGCAACTT GCCAAAGTGA CGCCTCTACT
    GGAAGATCTC AGGTCAAAGA AAGAAGAAAG AATAAAACAA TTCTCACTTG
    TCCAATCTCA AATCGAGAAG ATAAAAGCAC AAATTTCGGA TCACAATAAT
    CAGCATGACA ATGGTCCGGT CAATCATTCC AAGGACAATC ATGATTTGTC
    AACCAGAAGG CTTTCTGATC TTCAAGCGGA GCTTCGCAAT TTACAGAAAG
    AGAAGTCTGA TCGCCTTCAG AAGGTCTTCA TATACGTCGA TGAAGTGCAC
    TGCCTATGCT CTGTGCTTGG GATGGATTTT GCAAAGACAG TTAAAGATGT
    GCATCCAAGT TTACATGGGG CCAACTCAGA AAATTCAACG AATATCAGTG
    ATAGCACTCT TGAAGGTCTT ACTGAGACCA TCCTTAAGCT CAAAGCAGAA
    AAGAGGACTA GAGTTTCGAA GTTGCAAGAA ATCGTCGGAA AGCTCCACAA
    GTTATGGAAT TTGATGGAGT CAACTGAACA AGAGAGGAGA CATTTCACCA
    GAGTAGCTGC TGTTCTTGGA TCTACTGAGG AAGAGATCAC TTCATCTAGT
    GTCCTGTCGC TGGAGACAAT TCAGGAGACA GAAGAGGAAG TTGAGAGACT
    AACTAAACAA AAGGCAAGTA GAATGAAGGA GCTTGTTCTT AAGAAAAGGT
    TAGAGCTAGA AGATATCTGC AGTAATGCGC ATATGGAGCC TGATATGAGC
    ACAGCACCTG AGAAGATAAC CGCATTGATT GATTCTGGTC TAGTGGATCC
    TTGTGAACTT CTTTCCAGCA TTGAAACACA AATAGCAAAA GCGAGGGAGG
    AGTCCCTAAC CAGGAAAGAT ATCATGGAGA AAGTAGACAG ATGGCTATCA
    GCTTGTGATG AAGAAACTTG GCTTGAGGAA TATAACCAAG ATAGTAGCAG
    GTATAGTGCT GGTAGGGGTG CCCATATAAA TCTCAAGCGT GCAGAGAAGG
    CAAGGATACT TGTTCAAAAA ATACCATCAA TGATTGACAA CTTGATAGCT
    AAAACATTTG CGTGGGAGGA TGAAAGAAGT GTGCCATTTT TATATGATGG
    AGCCCGTCTT GTTGCCATTT TGGAGGAGCA AAAACTCAGA AGGGTACAAA
    AGGAAGAAGA CAAGAGACGA CACCGGGACC AGAAGAAACT GCAAAGCTTA
    TTGCTTAAGG AGAAAGAGTT GATTTTCGGC TCCAAACCTA GTCCAAAAAA
    GACAAGCAGC TTTAATAGGA GGACGAGCAG CCATCACCCG AATGGAAATG
    GAGCTGGGTT CATGACCCCG GTGCCCCGTA GAGTTTCTGC AGGCAGTGCC
    ACTCCTGAGC TTCTAACTCC ACGCTCATAT TCTGGACGGT ACAATAATTA
    CTTCAAAGAG AACAGGAGGC TGGCTGCTGC ACCACTGAAC TTCTCAACGG
    TTTCGAAGGA GGATAGTATG TCATCCTTTG CCTCCATCAG CGGCTCAGAA
    CCTGATTCTC CTTTGGTTTT GCACTGAGAT CCCATCGTTC GATTGGACAT
    TTTCGAGAAT GTCACAGTTG ATCTTTTGAG GTTCTGATAA TCCTGATTTC
    CAAATGCTGC ATTTCTGGTT AGGGATGAGA GACTTCTCAG CAAGAAGGAT
    GGTAGTGAAG ACTATCCACG ACATTGGGCC ATTGTGTGTT AACTGGTTGA
    CATTGCTAAT GAGTGACGAC AGGTTGTGAC AGGATTTAGA TAAGATTTGC
    CTGTAGATAT ATGACCTAAC ATCTGCGGTG CTGTTGTACC TAAATTACGT
    CGATTGATCA GTGGGTTGGT TAGGAAGCAT GCCTAAGTTG TGCATTATAT
    TCGTTTTCTT GGTATTCTTT GAGTTTTGTA TTTAGTCATT GTTTTGCATG
    TGAAAAGGAG TTGGTGTTGA TTTGCAATCC AAAGGTGCTG TGTAATTTCA
    TCCTGCAGAC TCAACCTGAG GCCTTTGATT TGTGTGCTGT ACTGCTATGG
    AAATCGTAGT TCATACTTCA TTCAGGAAGG AAAGAAGAAA ACAAGGAGGG
    AGCATACTAG TACATAATAA AGAGAAAGAA ACAGAATTAA ACATGGGAGG
    AGCCCGAAGA AATAGCAATT GAGAAGACAG CCTTCCACCC ATCTAGGGCC
    GGTCCATCTG CTTCTTTGAT GTAAAATTCA CGCACCTGAT GGTGGTTGAT
    TATTGAAGAT AACGTTGTTT TTGTGATTCC AAATCCTCCA AAAAGCAGAG
    GAGATAGAAG CTCTGATAAT CTTTCATTGC GATAGAAGCT CTGATAGTCT
    TCAACTGAGG AAATATTTGG CCAGCACCCC TATTTTGGAC CAGAAAGAAG
    CAAATTACCT TTTGCTGACG GAGGGAGTAC ATTTTACAAC ACCCTTGCTG
    CATTTTGGTC TTCCAAAGAT ATAGGGAGGC CTGACATGTG TAAAGAACAA
    GCCTGTGTAG TAGCTAAAAC GCCAGTGAAC AGCAGAACAG TAAACAACTT
    GAGAATTACC CCTTTCTTAG CATGAAACGG CAACTCCAAG ATAAAGTTGA
    CAC

    Gene models with high sequence identity

    1. AT2G01910.1 [+] show detail - Microtubule associated protein (MAP65/ASE1) family protein
      E-value: 1e-164; Score: 578.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Microtubule-associated protein, MAP65/ASE1-type 4.80000000000003e-60
    HMMPanther Microtubule-associated protein, MAP65/ASE1-type 4.69998262512756e-109

    See the detailed result >

    AT2G01910.1

    Model type
    Protein coding
    Short Description
    Microtubule associated protein (MAP65/ASE1) family protein
    Curator Summary
    Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria.
    Computational Description
    ATMAP65-6; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-7 (TAIR:AT1G14690.2); Has 5922 Blast hits to 4912 proteins in 547 species: Archae - 118; Bacteria - 527; Metazoa - 2917; Fungi - 542; Plants - 628; Viruses - 11; Other Eukaryotes - 1179 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR