K01441

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01441

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01441

Determination of introduced cDNA(s)

  • J023042M07 - Rice Full-length cDNAs - Original: J023042M07

    full reading [+] show sequence

    Nucleotide sequence: J023042M07 - full reading 
    GAATGGCCAT CACAGTGTCT ATCTATCTTG TGAAGATGCC AATCTACTTG 
    GAGACGAGAG GCACATCGAG AATCTCACTG GTAGTGCATC ACATCAGAAG 
    AAGGACGCAC TCTTCTTCTT CTTCTCGTCT CCGATTCCAA CGAGGCGGCG 
    GAGCAGAGCA GAGGCGCGGG ATGGCGGCGG CGCAGGGGAG CGGAGTGCCG 
    GCGGCGCTGG CGCTGAGCAG CGGCCACACG ATGCCGTCGG TGGGGTTGGG 
    CGTGTGGCGG ATGGACTCCC CCGCCATCCG CGACCTCATC CACTCCGCAC 
    TCCGCATCGG CTACCGCCAC TTCGACTGCG CCGCTGATTA CCAAAACGAG 
    GCTGAAGTTG GGGATGCACT TGCAGAGGCA TTCCAAACTG GACTTGTCAA 
    GAGGGAGGAT CTTTTCATCA CAACCAAGTT GTGGAACTCA GATCATGGGC 
    ATGTGGTTGA AGCATGTAAG GATAGCTTGA AAAAGTTGCG GCTAGATTAT 
    CTAGATCTCT ACCTTATCCA CTTCCCAGTA GCTACCCGTC ATACTGGAGT 
    TGGTACGACT GCTAGTGCTC TTGGTGATGA TGGTGTGCTA GACATTGATA 
    CCACTATCTC ATTGGAGACA ACATGGCACG CTATGGAGGA TCTTGTTTCC 
    ATGGGACTGG TTCGCAGCAT TGGGATTAGC AACTATGACA TATTCCTTAC 
    CAGAGATTGT TTGGCTTATG CTAAGATAAA GCCCGCAGTG AATCAAATCA 
    AGACACATCC CTACTTCCAG CGCGACTGTC TTGTCAAGTT CTGCCAGAAG 
    CATGGGATCT TAGTCACTGC CCATACCCCT CTGGGTGGCT CCACTGCCAA 
    TACTGAGTGG TTTGGGTCCG TCTCATGCCT CGACGACCCT GTCATCAAGT 
    CTCTGGCTGA GAAATATGGC AAGACACCGG CGCAGCTGGT GCTCCGGTGG 
    GGGCTTCAGA GGAACACAGT GGTGATCCCC AAGACATCCA AGGAGGAGAG 
    ATTGCAGGAG AACTTTGCGG TCTTCGATTT CGCCATCTCC GACGAGGACA 
    TGGAGAAGAT GAGATCCATC GACCGGAAGT ACCGCACCAA CCAGCCTGCC 
    AAGTTCTGGG GAATCGACCT GTTTGCTTGA TGAATTATGA GTCTTTAGCA 
    CGAACAATAA TGGGGGCTTT TCTACTGTCC CTGGGAGCTT CTTGTGCAAT 
    CATTTTTCTC TGAACTGAAA CTTCTTGTGC TGAAGGATGA AGTTGTTGGG 
    ATCGTGTGAA CTTGAATTGT TATTCAAAGG GAAAAAAAGA GTGTGAACTT 
    GAATTGTATC TATATTTCGT GTATTTGCGC TTCTGCAGCC CGCCTAATCA 
    ATAAATTTTT AGCATCCCTG CTAAGTATCA TGAAATTTCA TATCC

    Gene models with high sequence identity

    1. AT2G21250.1 [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
      E-value: 5e-142; Score: 501.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Aldo/keto reductase, conserved site 0
    PatternScan Aldo/keto reductase, conserved site 0
    PatternScan Aldo/keto reductase, conserved site 0
    HMMPfam Aldo/keto reductase 2.1e-57
    HMMPanther ALDO-KETO REDUCTASE 1.5e-99
    HMMPanther Aldo/keto reductase 1.5e-99
    Gene3D Aldo/keto reductase 5.3e-98
    FPrintScan Aldo/keto reductase subgroup 4.4e-54
    FPrintScan Aldo/keto reductase subgroup 4.4e-54
    FPrintScan Aldo/keto reductase subgroup 4.4e-54
    FPrintScan Aldo/keto reductase subgroup 4.4e-54
    FPrintScan Aldo/keto reductase subgroup 4.4e-54
    superfamily Aldo/keto reductase 9.7e-95

    See the detailed result >

    AT2G21250.1

    Model type
    Protein coding
    Short Description
    NAD(P)-linked oxidoreductase superfamily protein
    Computational Description
    NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: cultured cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G21260.1); Has 23237 Blast hits to 23200 proteins in 2399 species: Archae - 409; Bacteria - 15760; Metazoa - 2015; Fungi - 1895; Plants - 1372; Viruses - 0; Other Eukaryotes - 1786 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR