K01442

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01442

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01442

Determination of introduced cDNA(s)

  • J023115O16 - Rice Full-length cDNAs - Original: J023115O16

    full reading [+] show sequence

    Nucleotide sequence: J023115O16 - full reading 
    GACTACTGAT TTTCCCTTCG TCAAGCGACT CCAAAACGTG CCCCATATCT 
    AATCTGTCTC GCACGCGGCC GGCGGCGGAA GAGCAGAGCA TCAGGCGCGT 
    GTGGATAGCC GGAGGACATG GCCACCCACT TCACGCTCAA CACCGGAGCA 
    CGCATCCCCT CGGTGGGCCT CGGCACCTAC AAGGCCGGCA CCGGCGTCGT 
    CGCCGACGTG GTCTCCGCCG CCGTCAAGGC AGGGTACCGG CACATAGACT 
    GCGCGCCGCT GTACAAGAAC GAGCAGGAGA TTGGTGGTGC TCTGAAGAAG 
    CTCTTCGATG ATGGGGTTGT CAAGCGGGAA GACCTCTTCA TCACCTCCAA 
    GATATGGTGC TGACTGCTGC TGTCTTGTTC CTTCTATTGA CCGACCTCAA 
    CTTCTGAACG CTACTAGTAG TGCAAGTTTA TTCTGCTATT TCGAATTATG 
    TTCTATCCCT TCCTCTTGAA GACGTCCCAA ACTCTGCAGG TGCAGCGACC 
    TCGCACCTGA AGATGTCCCA CTCGCAATGG ATAGTACACT GAAAGATCTG 
    CAGCTGGATT ACGTTGATCT GTATCTGATT CATTGGCCGT TTCAGATCAA 
    GAAAGGCACG GAGCTCAGTC CAGAGAACTT CGTCAAGCCT GACATACCCA 
    GCACCTGGCG AGCGATGGAG CAGCTGTACG ATTCAGGCAA AGCTCGCGCG 
    ATCGGCGTGA GCAATTTCTC CTCCAAGAAG CTTGGCGATC TGCTCTGCGT 
    CGCCCGCGTC CCTCCGGCCG TTGATCAGGT CGAGTGCCAC CCGGGCTGGC 
    AGCAGGCGAA GCTCAGAGCG TTCTGCCACA CCAGTGGCGT TCATCTCTCT 
    GCGTATGCTC CATTGGGCAG GATGAAGGGC ATCGCCGTTG ATTCGGTGTT 
    GCCATCGGTA GCCGAGATGC TAGGAAGAAC TCCGGCTCAG GTTGCTCTGC 
    GCTGGGGTCT TCAGCAGGGT CAGAGTGTGC TTCCCAAGAG CGTCAGTGAG 
    GCGAGGTTGA AGGAGAACAT GGATCTGTTT GGTTGGTCTA TTCCTGAGGA 
    ACTGTGTGCC AAGCTCTCTG AAATCGAACA GGTTAAGCAA ATCAGAGGAG 
    ATGGATTTGC TCACCCCGAG AGTGTCTACA AAACCTACGA GGAGCTTTTT 
    GATGGAGAAA TCTAAAAGAA TGGAAATCAC CTATGTGAAA CAAAATGTGC 
    CATTACTGTA AAAGAACGAT GAAAAATAAC AGGCATTTCA C

    Gene models with high sequence identity

    1. AT2G37790.1 [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
      E-value: 2e-79; Score: 293.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther ALDO-KETO REDUCTASE 2.2e-31
    HMMPanther Aldo/keto reductase 2.2e-31
    HMMPanther ALDO-KETO REDUCTASE 2.8e-63
    HMMPanther Aldo/keto reductase 2.8e-63
    HMMPfam Aldo/keto reductase 4.1e-12
    HMMPfam Aldo/keto reductase 1.6e-34
    Gene3D Aldo/keto reductase 2.7e-25
    Gene3D Aldo/keto reductase 3e-55
    FPrintScan Aldo/keto reductase subgroup 1.5e-38
    FPrintScan Aldo/keto reductase subgroup 1.5e-38
    FPrintScan Aldo/keto reductase subgroup 1.5e-38
    FPrintScan Aldo/keto reductase subgroup 1.5e-38
    superfamily Aldo/keto reductase 2e-27
    superfamily Aldo/keto reductase 5.4e-55
    PatternScan Aldo/keto reductase, conserved site 0
    PatternScan Aldo/keto reductase, conserved site 0
    PatternScan Aldo/keto reductase, conserved site 0

    See the detailed result >

    AT2G37790.1

    Model type
    Protein coding
    Short Description
    NAD(P)-linked oxidoreductase superfamily protein
    Computational Description
    NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37770.2); Has 24755 Blast hits to 24730 proteins in 2482 species: Archae - 413; Bacteria - 16802; Metazoa - 2096; Fungi - 1772; Plants - 1239; Viruses - 0; Other Eukaryotes - 2433 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR