K01520

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01520

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
cauline leaf (PO:0000013)
  • decreased size (PATO:0000587)
    (Cauline leaf::Shape::small)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • present in greater numbers in organism (PATO:0000470)
    (Rosette leaf::Number::many)
sporophyte vegetative stage (PO:0007134)
  • decreased speed (PATO:0000304)
    (Adult plant::Growth::slow)
stem (PO:0009047)
  • decreased thickness (PATO:0000592)
    (Stem::Shape::thin)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Original: K01520

Determination of introduced cDNA(s)

  • J023120A05 - Rice Full-length cDNAs - Original: J023120A05

    full reading [+] show sequence

    Nucleotide sequence: J023120A05 - full reading 
    TTGGGTGAAA GACTTGCCTA TTGATTGACC CGTCTCCATC AATATAGTGA 
    GTCCATAGCA TTTCCCCTCT TCCCAATAGC ATAAGCACGA ACCTTCTTGT 
    AGTGTCTATC CAGCAAAAGA AGAGAAAACA TATGCTATAA TGGGGTGCTT 
    CAGGTGATGG GAACATCGAT GAATAGGAGG AGCTTGCTTC AGGCCAAGGG 
    TGGCTGCCCT GTGAGCTTTG AGAACCAGAA CTACACGACC ATCACCAGCA 
    AGTGCAAATC GCCATGGCCT GCCGACCTCT GCTGCCCAGC TCTGAACGAG 
    TTCGCATGCA ATTTCAGCCA ATATATCAAC GACGAAAGCA CCAACTGCGC 
    AGAATCGATG TGGGTCTACC TCAACGCCCA TGGAAGCTAT CCAGCTGGCC 
    TGTTTTCAAA CGAGTGCGCA GTGCTTGACT GCAACGGTAA CAATAGCACC 
    ATTAGTACTA ACCAAACTGC TAATGGAAGC GGCACCCGAG GGGCTAAAGG 
    AATATCAGAG ATGTACTCAC TTGTGACGAC CTTAATTGTA TCTGGACTCC 
    CGGTGTTATT GTTCTACTGA ATGAAGTACT CTCTCCGTTT CACAATGTAA 
    GTCATTCTAG CATTTCCCAC ATTCATATTG ATGCTAATGA ATCTAGATAG 
    ATATAGAATG ACTTACATTG TAAAACGGAG GAAGTAAGAA AAGATACACT 
    ATCACACAGA ATGGACATGT TACAGTTGTG GTAATAAGTT GCGTTTCAGC 
    ATATATATAC ATTACGAGAT AAGAGTACCC CCT

    Gene models with high sequence identity

    1. AT4G28280.2 [+] show detail - LORELEI-LIKE-GPI ANCHORED PROTEIN 3
      E-value: 6e-22; Score: 101.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G28280.2

    Model type
    Protein coding
    Short Description
    LORELEI-LIKE-GPI ANCHORED PROTEIN 3
    Computational Description
    LORELEI-LIKE-GPI ANCHORED PROTEIN 3 (LLG3); BEST Arabidopsis thaliana protein match is: LORELEI-LIKE-GPI ANCHORED PROTEIN 2 (TAIR:AT2G20700.1).
    Link
    InterPro Scan - TAIR