K01520

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01520

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
cauline leaf (PO:0000013)
  • decreased size (PATO:0000587)
    (Cauline leaf::Shape::small)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • present in greater numbers in organism (PATO:0000470)
    (Rosette leaf::Number::many)
sporophyte vegetative stage (PO:0007134)
  • decreased speed (PATO:0000304)
    (Adult plant::Growth::slow)
stem (PO:0009047)
  • decreased thickness (PATO:0000592)
    (Stem::Shape::thin)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Original: K01520

Determination of introduced cDNA(s)

  • J023120A05 - Rice Full-length cDNAs - Original: J023120A05

    full reading [+] show sequence

    Nucleotide sequence: J023120A05 - full reading
    TTGGGTGAAA GACTTGCCTA TTGATTGACC CGTCTCCATC AATATAGTGA 
    GTCCATAGCA TTTCCCCTCT TCCCAATAGC ATAAGCACGA ACCTTCTTGT
    AGTGTCTATC CAGCAAAAGA AGAGAAAACA TATGCTATAA TGGGGTGCTT
    CAGGTGATGG GAACATCGAT GAATAGGAGG AGCTTGCTTC AGGCCAAGGG
    TGGCTGCCCT GTGAGCTTTG AGAACCAGAA CTACACGACC ATCACCAGCA
    AGTGCAAATC GCCATGGCCT GCCGACCTCT GCTGCCCAGC TCTGAACGAG
    TTCGCATGCA ATTTCAGCCA ATATATCAAC GACGAAAGCA CCAACTGCGC
    AGAATCGATG TGGGTCTACC TCAACGCCCA TGGAAGCTAT CCAGCTGGCC
    TGTTTTCAAA CGAGTGCGCA GTGCTTGACT GCAACGGTAA CAATAGCACC
    ATTAGTACTA ACCAAACTGC TAATGGAAGC GGCACCCGAG GGGCTAAAGG
    AATATCAGAG ATGTACTCAC TTGTGACGAC CTTAATTGTA TCTGGACTCC
    CGGTGTTATT GTTCTACTGA ATGAAGTACT CTCTCCGTTT CACAATGTAA
    GTCATTCTAG CATTTCCCAC ATTCATATTG ATGCTAATGA ATCTAGATAG
    ATATAGAATG ACTTACATTG TAAAACGGAG GAAGTAAGAA AAGATACACT
    ATCACACAGA ATGGACATGT TACAGTTGTG GTAATAAGTT GCGTTTCAGC
    ATATATATAC ATTACGAGAT AAGAGTACCC CCT

    Gene models with high sequence identity

    1. AT4G28280.2 [+] show detail - LORELEI-LIKE-GPI ANCHORED PROTEIN 3
      E-value: 6e-22; Score: 101.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G28280.2

    Model type
    Protein coding
    Short Description
    LORELEI-LIKE-GPI ANCHORED PROTEIN 3
    Computational Description
    LORELEI-LIKE-GPI ANCHORED PROTEIN 3 (LLG3); BEST Arabidopsis thaliana protein match is: LORELEI-LIKE-GPI ANCHORED PROTEIN 2 (TAIR:AT2G20700.1).
    Link
    InterPro Scan - TAIR