K01539

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01539

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01539

Determination of introduced cDNA(s)

  • J013071H20 - Rice Full-length cDNAs - Original: J013071H20

    full reading [+] show sequence

    Nucleotide sequence: J013071H20 - full reading
    GTGCGGCGGT GTCCGGATTC TTCTTCTTCT TCTTCTTCCC TCGTCATCCG 
    GGAACGCGGC GAGGAGGCGG CCTGGCTACA GGACGTCTTC TTCTTCCCTC
    TCGTCTTCCC CCTCTTCTCC AACCTTCTCT TCACGGGCCA AAAAAAATCT
    TTGGTAATTG GTACGGTCCG CCATGCGGGC GGTGCCTTGT CGAGCTCGGA
    AGACGGCATG AGTGCTGTAA TATTGGTTGG ATTCAGTTAT GAAATTAAGT
    AGTACTGAAT AATGAGATTC GGGTTGGATC AAATTTATTC GAACGGGATC
    GGTTTTGTTC TTTTGTTTTT GGAAAGAACC GAATAGTTTC TTTTTAACTA
    TTTCCTCATT TTAAAGAACG GTATTATGCG ATTCAAATCA AATCTACGCA
    AGTCAAAATT TCAACAACCA GTTGCGTCAA CATGCTTTTT GTCTGGTTAA
    AAGAACTGAA AGTACGTACT ATGCTTTTTC TCTGCTTTGA TGTGTGATCT
    TAGTCCTTTT GTTCCTTTCT TGTTATTCTC TGAATTTCTC CTGTCCGTAT
    TCTAAATTGG AAAATTGCAT TGATCATGAG CAGTTTGCGT TGTGTGTCAC
    AAAATCATGA GGATTCAATT AATTACTTGT TCATGAGGGT GGTGTATATG
    CCATTGTGAT TTAGCTTTCT GAGGATTCAA TTAATCTCTC ATTTAGGGGA
    TAAGAGGATA GATTCTGAAA ATATATAAGA TGGCACCTGG ATGTCATTGT
    GATTTAGCTT TTAATTAATC TCTCATTTAG GGGATAAGTG GATAGATTCT
    GGAAATATAT AAGATGACAC CTTGATGTCA TTGTGAAGCT TTAACATTTT
    TTTTAAGGTA TTTAGCTTTT ACTTCGATCT GAATTTCTAA ACCCACCATT
    TTTTTCGTTT GTGTTCAACC AGAGATGCGG CATTGGCTGG ACTTCGTGTG
    GCAGAGCGTG CCTATTGGAA GGAATTTGTG GACAGAGTAT TGAAAGATAC
    CAGCAGCATT GATATAACTG CGTCAAATAT AGCTGTTCCC ACAAGGCTAC
    CTGTCGAGCT GCAAGTCCTG ATCAAGGTTA TGATCCACCA GATTCTTAAC
    ACTCAGCCTG GAGCAATCCC TCCACTAGCA TTTCATTGGT GTTGCAATCA
    GCTTCTTCAG CATTTGGTGA ATTCAGTAAG AACCCAAGGA CAGCCAACTG
    TTGAACCAAA TGTACATGGA CATCAACGTT GCAGGGGTGC AGGTTGGTCA
    TCGGGGATTC CCGAACGATT GGCCGATCGA AATGTTTCAG AAGATGGAGG
    TATTGGAGGA GTTGATTCGA GGAGGAACAT TAGAGAGATG AATGGTAAAA
    CTAAAGAGAC AAATGCAAGT CGTGAGTCAC CCCGAATCCT CAAGCCTACT
    GGTGAGCCAA ACCCATCCAC TGGTGGCATA CGGATTCAGA ATAATCGGCA
    AGAGCAACCT GCAGAAATGA CCATTTTCCA TCCATGGAAA AACATTACTG
    ATAGAACATC AGCTTATGAG CTAAGCCATA TTGACAACTT GGTTAATCAT
    GAAGATGATG AGACAAAGAG GCAGAAAGAA CAGAGTGTTC ACATCACTCT
    GTTGTATGAG ATCAACCTCA TCAACGAAGA GCTTTTCGAT ACCGTGATCA
    GTATCACCGG TCACAAACAT GGTGGGACAG TGATCAAATT CAGCTACAAT
    GCAGTGTCTC TTGCACAAGA CATGGAGCTA CCATTTGCAG CATACGGAAC
    GTCTCCTCTC AAGCCGGCGA AGCTATTTGT CCCAGCTGAT TATCCTCGAA
    GCTCCCCGGT GTACGAAGAT GGTGATGAAC AGCACCAGGG AATGTACAGC
    GTGATTTCAG GCATGGTTGA CAAGGTGTTC CAGCGTGCCC TGCGTAAACT
    CCCGGTGCCA ATGTCGATCA GGGACATGGC CCGGCAGTGG GGCATCTCCG
    TGCGAACGGT CACCAACGGT GGAGGAACGT TCAGCTCCGG GTATGGCCAG
    TGGGAGAGTT GCACCGATGA GTTTGCAAGT CCATAGTCCA TGGATAGACC
    CATGAAGTTT TGCAGGAACA AGTGATATGA AGAATAATGC TGATCTGCTG
    TTTTGCTGTA GGGCAGATGC AGAATCCAGT GTGAGTGTTG TGAGAGAATA
    TTTATATTTT TGTTATGCAT TAAGAGGCTG TGTGGATCAT CTGTTTTTGA
    TTAAACCGGT TTTGCTTAAA AAATATTTCT TACT

    Gene models with high sequence identity

    1. AT1G15780.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); ...
      E-value: 0.000000000002; Score: 71.60

     

    InterPro Scan Digest

    See the detailed result >

    AT1G15780.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR