K01550

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	cauline leaf (PO:0000013)	abnormal (PATO:0000460) (Cauline leaf::Others)
	rosette leaf (PO:0000014)	present in greater numbers in organism (PATO:0000470) (Rosette leaf::Number::many) abnormal (PATO:0000460) (Rosette leaf::Others)
	sporophyte vegetative stage (PO:0007134)	decreased speed (PATO:0000304) (Adult plant::Growth::slow)
	stem (PO:0009047)	abnormal (PATO:0000460) (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01550

Determination of introduced cDNA(s)

J013046E13 - Rice Full-length cDNAs - Original: J013046E13

full reading [+] show sequence

GATTCTCTCC CAACCACACT CTCCCGCAAC GGCCAAATCG ACGCTAGCTA 
TGCTAACCAG CTCCTCCTCC AACTCCAATT CGCTCACCCT CTCCTATTCT 
CTCTCTTCGC CACGCTCTCA TCCCAGGAAG GAACTCGACG GGGAGGATTC 
AGGCCAGGTA CCTTTGCTGC TTCTTTCTCA ATTATTTCTC CTGTTCCTCT 
TCTGCATTCG TCTCTTGAGA GTTCACAACT GCACCGAATT TCCCCCCTCC 
TTTGTTTTTT TTCTAATCAT GCGGTTTTGC GGTCATAAGC ATGACGAAAT 
CTTGAACAAT AGGATCGGTT CTTGCGCTCT TTGTCACTAC AACTGCAAGC 
CATGAGGTTT GTGCAGGTTC CAATTAATCG TGCTACTGCA ACATTGCAAC 
CTGTTCCATC TTTTGGTTTA TTATTATATA TGTTCCGTAA TTAGAGCATG 
GATTTACAAG TTTCAATATG TATGTCCATC TGTCCATTCA GCTTTGGTGC 
AGCTAAGCTA GCAATTAACA AACAGTTGGA CCATATCTGC AAGCACGAAC 
AACTTAATTT GCTTAATAAT TTGTGTGTAA CAATATGTTG CCGTCAGATA 
TATCTTCAGT TTTGTGTTAC ACCTATGCTG TGGGATGGAC GAAGCTCCGG 
CACCTCTCGG TTCATCCGCC TCTCACCAAG AATCAGAGGG AGATCAATGC 
CAACTGCAAG CTGATCGGAG CCATGCATCA GCCTCCAATG ACAGCAGCAG 
CAAAGCGTCG GATCAGATGG CCAACCGCTC CGTTCAGACG CGCATCGACA 
CCACGGCGCC CATCGATTCC GTCAAGGGCG CCGCCAACAA GTTTGGAGGA 
AGTCTTGATT TGAGAGAAGT AACTTAATTA CATCGATCTC CATTGCTATT 
GATCTTGTGG TTAAGCTTAA GCCAGTGATT AGCATTTTGA TTTTTTTTGT 
GTGATTTGTT GTGTCTCAGA GGCGCAAGCA AGCGCAGGAT GAGCTTGACA 
AGGTGCAGGA AAAGGTGAGC GAGTGCCTGA AGGGATCACA AGAAGCGGAA 
GCCGGGAGGG CACAGGCGGT GAAGGAGCTA GGCGGCGCCA ATGGCGTGAT 
CGATGAGCTG ACGCTAGGCT TGGAGATGGC GTCGCCGCGC ACGGGGCTCG 
CGGAGATCTC CGTGTTCGAC GGCGGCGAGG GGCGCGGGAA CCCGCACATA 
CTGAGCCCGA GAGGAGGGTA TATGCCGAGG ACTGAGATGG CGGCGGCGGA 
GGTGGAGGCG GGCGCGAAGC AGAGGCCTAC CTTCTTCCCG CGCATGGTGA 
TGTTTCTGGC GCGCAAGAGA GCTCAGAACT GGAAGTGAGA TCTTCCTCTC 
TTCCGCATTT TGAATTTGTG TTTGTACAAC TACATGGTAT ATACGTGCCC 
AGATCAGATG ATGAAACTTA ACTTGTGTAA CATCTATCGA TCAAAGAGAT 
ATAGCTCATG AAATTTTTTG CTCG

Gene models with high sequence identity

AT4G33390.1 [+] show detail - Plant protein of unknown function (DUF827)
E-value: 7e-08; Score: 31.20

InterPro Scan Digest

See the detailed result >

AT4G33390.1

Model type: Protein coding
Short Description: Plant protein of unknown function (DUF827)
Computational Description: Plant protein of unknown function (DUF827); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF827, plant (InterPro:IPR008545); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF827) (TAIR:AT2G26570.1); Has 166665 Blast hits to 84155 proteins in 3581 species: Archae - 2138; Bacteria - 38967; Metazoa - 69244; Fungi - 13477; Plants - 9635; Viruses - 620; Other Eukaryotes - 32584 (source: NCBI BLink).
Link: InterPro Scan - TAIR