K01604

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01604

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01604

Determination of introduced cDNA(s)

  • J033077J01 - Rice Full-length cDNAs - Original: J033077J01

    full reading [+] show sequence

    Nucleotide sequence: J033077J01 - full reading 
    GTTTGCATGC CCTCCTCCTC TTCCTCCTCT CCTCCCCCAT CCAGACCTCC 
    AAGCCCTGCA GTAGCAGTAG CAGCTGCTGT ATTAATGGCG CCGTAGGCAG 
    CTCACTGCAG CATCCATCGC CCCAGGCAAT GGTGGTGGTA GTTTGCTCTC 
    TTCTCCCTCC TCGGCTCAGC CCGAGCTGCA TGCCAGCTTA AATGCTTCCC 
    CAGAGCGAGC TCATCTCGCT CTCGCCCGAT CCAACGCCGC ATAGCTAGCT 
    AGCTAGCTAC CTCGTCGCTG CGTTGTGTTT GTGCTGCTGC ATTGCGACAT 
    TCCGATCGGA GCTTAGCTTA GCTTTCGTCG TCGCGAATGG CGACGCGAGG 
    GCGGATTGTA GCGGCGGTGG CGAGCGTTGT GGTGGCGTGG CTGGCGGTCG 
    CCGTCGGCGT GAACGGCGGC GGGTGCGAGG CGGAGCGGGA CCGGGTGGAG 
    GCGCTGCCGG GGCAGCCACC GGTGGCGTTC GCGCAGTACG CCGGGTACGT 
    GGCGGTGAGC GAGGCGAGCG GGCGGGCGCT CTTCTACTGG CTCACCGAGG 
    CCGCCGCCGC CGCCGCCGCC GCCACCAAGC CCCTCGTCCT CTGGCTCAAC 
    GGCGGTCCTG GATGCTCATC GATTGCGTAT GGAGCATCTG AAGAGATTGG 
    CCCATTTAGG ATTAAGACAA ACGGGACAGG GCTCTATCTG AACAAGTACT 
    CATGGAACAG AGAGGCAAAC CTCCTGTTCC TGGAATCACC TGCCGGAGTT 
    GGCTTTTCAT ACTCCAACAC CACCTCTGAT CTCAAGACAT CTGGTGATGA 
    GAGGACAGCT CAAGATGCGT TGCAGTTCTT GATCAGTTGG ATGTCCCGCT 
    TCCCACAGTA TCGGCACCGG GATTTCTACA TTGCTGGAGA AAGCTATGCT 
    GGACATTACG TTCCCCAGTT GGCAAGGAAG ATCGTTGAGT TCAACAAGGC 
    CTCACCATAT CCTTTCATCA ACCTCAAGGG GATCCTTGTG GGCAATGGGG 
    TGACTGACAA CTACTACGAC AACATCGGCA CGGTGACCTA CTGGTGGACG 
    CACGCCATGA TCTCGGACAC CACCTACAAG GCCATCATGT CGTCGTGCAA 
    CTTCACCAGC GCCAACGTCT CCAGGCTCTG CAACCGCGCC ATGAGCTACG 
    CCATGAACCA CGAGTTCGGC GACATCGACC AGTACAGCAT CTACACGCCG 
    TCCTGCGCCG CCGCCGCCGC CGCCAACGCC ACCGGCCGCC GCCGCGGCAA 
    GGCCGCCGTG CTGAGGTTCA AGGACACCTT CCTACGGCGC CGGTCGTTCG 
    GCTACGACCC CTGACGGAGA CATACGCCGA GAAGTACTAC AACCGGCAGG 
    ATGTTCAGAA GGCCATGCAT GCCAACATCA CTGGGATTCC TTACAGATGG 
    ACAGCCTGCA GTGATGTGCT CATCAAGACG TGGCGAGATT CAGAGTTCTC 
    CATGCTGCCG ACTTACAAGT TGCTGATGAA GGCCGGGCTG AGGATATGGG 
    TGTTCAGGTG AGCTGGAGGA CCTGGAATTG GTGAATTTAT CCTTTTGGTT 
    CAGCATGGAA CTAGTTCTTC AGAGATCATG AGCTATTTGT CACTTGATGA 
    AAATGCAGTG GCGACACGGA TTCAGTCGTT CCGGTTACTG CAACGAGGTT 
    TGCGCTTAGC CATCTTGGAC TGAAGACGAA GATCCGCTGG TACCCTTGGT 
    ACTCAGCTGG ACAGGTTGGA GGATGGTCTG AGGTGTATGA AGGGCTCACA 
    TTTGCGTCAG TGAGAGGTGC TGGGCATGAG GTGCCACTGT TTCAGCCAAG 
    GAGAGCATTC AGGATGTTTC AGTCGTTCTT GGCAGGGGAG CCATTGCCAA 
    AATCCTGATG GTTTCCTGCC AACAACTGAT GTCTAGCTAC AAAGTCTAGA 
    AATCTGTAAA AGATGCTTGG TAGAGGTGCA GTGTAGTTGA TAGGTGAGGA 
    GTGTGATTGA TTGGTGTTGG GAAAAGGATA ATAAGAGAAT AAGGATGGTT 
    GTGCCATGGA AACCATGGGC ATCGCAACAA GGAGCTAATA AACTTGAAGC 
    CTTCCGCTCT GTTCC

    Gene models with high sequence identity

    1. AT4G30610.1 [+] show detail - alpha/beta-Hydrolases superfamily protein
      E-value: 6e-178; Score: 111.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Peptidase S10, serine carboxypeptidase 1.4e-93
    HMMPfam Peptidase S10, serine carboxypeptidase 4.2e-21
    HMMPfam Peptidase S10, serine carboxypeptidase 9.3e-11
    Gene3D no description 4.4e-88
    Gene3D no description 4.1e-21
    Gene3D no description 2.7e-06
    PatternScan Peptidase S10, serine carboxypeptidase, active site 0
    PatternScan Peptidase S10, serine carboxypeptidase, active site 0
    HMMPanther SERINE CARBOXYPEPTIDASE II (CARBOXYPEPTIDASE 1.5e-33
    HMMPanther Peptidase S10, serine carboxypeptidase 1.5e-33
    HMMPanther SERINE CARBOXYPEPTIDASE II (CARBOXYPEPTIDASE 1.7e-48
    HMMPanther Peptidase S10, serine carboxypeptidase 1.7e-48
    HMMPanther SERINE CARBOXYPEPTIDASE II (CARBOXYPEPTIDASE 2.8e-162
    HMMPanther Peptidase S10, serine carboxypeptidase 2.8e-162
    FPrintScan Peptidase S10, serine carboxypeptidase 1e-21
    FPrintScan Peptidase S10, serine carboxypeptidase 1e-21
    FPrintScan Peptidase S10, serine carboxypeptidase 1e-21
    superfamily alpha/beta-Hydrolases 2.5e-91
    superfamily alpha/beta-Hydrolases 7e-25
    superfamily alpha/beta-Hydrolases 8.1e-10

    See the detailed result >

    AT4G30610.1

    Model type
    Protein coding
    Short Description
    alpha/beta-Hydrolases superfamily protein
    Curator Summary
    Encodes a secreted glycosylated serine carboxypeptidase with broad substrate preference that is involved in brassinosteroid signalling via BRI1. It is proteolytically processed in vivo by a separate as yet unidentified protease.
    Computational Description
    BRI1 SUPPRESSOR 1 (BRS1); CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 22 (TAIR:AT2G24000.1); Has 3492 Blast hits to 3440 proteins in 297 species: Archae - 0; Bacteria - 59; Metazoa - 632; Fungi - 854; Plants - 1543; Viruses - 0; Other Eukaryotes - 404 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR