K01617

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01617

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01617

Determination of introduced cDNA(s)

  • J023133D10 - Rice Full-length cDNAs - Original: J023133D10

    full reading [+] show sequence

    Nucleotide sequence: J023133D10 - full reading 
    GACGTACTGA GCTCGAGCTT AATTAGCTCT AGCTAGCTGC AGCAATGGCC 
    ATGGGGGCTC GCCTCTGCAG CAGCAGCATT ATTGTTGTGG TGGTCGTCCT 
    GATTGTGGCG ACGGCGGCGG AGGCGATGCG GTGTCCGGGG ACGACGAGCG 
    TGTACCGGCG GCCGAAGAAG AAGGCGGCGG ACATGGTGGA CATGCCACTG 
    GACGCCGACG TGTTCGCGGA GCCGGCGGGG AGGAACGCGC CGCAGCAGGT 
    GCACATAACG CTGGGCGACC AGACGGGGAC GGCCATGACG GTGTCGTGGG 
    TGACCATGGA GGAGGCCGGC AACAGCACCG TCTTGTACGG CCTCGCCATG 
    GACAAGCTCG ACATGGCCGC CGACGCCACC GTCACCACCT ACACGTACTA 
    CAATTACACC TCCGGCTTCA TCCACCACTG CACCCCACTA CTAGGAAAAT 
    GATTTGTTGC CACGAAAAAA ATCGTGGCAA TAGATACATA TTGCCACCAT 
    TTTAAAACCG TTGCTAGCCG TGGCAATAGA AACAGTAGCA ATAGGTTATT 
    GCAACAATTT TTATCTAGTG GCAACAAACT TTGATAATGC CACAAAATAA 
    TCGTGGCAAA AAAACATATT GCAACACTTA ACATCGTTGC AACAAATAAT 
    TATTGCCACG ACTTCGTGCG TGGCATTAGT TGTGCTTGCC ACAAAATAGT 
    TTCGTTGCAA TATCTAATAT ATGTTATTGC CACATAGCAT TAATCGTGGC 
    AATATATCAT ATGGGTTATT GCCACTAAAA TATTTTTGTG GCAATAAGTA 
    TTATTACAAT GAAATGAATT TCTTCTAGCT TTTAT

    Gene models with high sequence identity

    1. AT2G16430.2 [+] show detail - purple acid phosphatase 10
      E-value: 1e-15; Score: 80.90

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Purple acid phosphatase-like, N-terminal 4.7e-26
    Gene3D Purple acid phosphatase, N-terminal 8.6e-22

    See the detailed result >

    AT2G16430.2

    Model type
    Protein coding
    Short Description
    purple acid phosphatase 10
    Computational Description
    purple acid phosphatase 10 (PAP10); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 12 (TAIR:AT2G27190.1); Has 1830 Blast hits to 1814 proteins in 380 species: Archae - 3; Bacteria - 548; Metazoa - 186; Fungi - 79; Plants - 763; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR