K01802

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01802

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01802

Determination of introduced cDNA(s)

  • J033092D07 - Rice Full-length cDNAs - Original: J033092D07

    full reading [+] show sequence

    Nucleotide sequence: J033092D07 - full reading
    GGTGTGTGTG TTTGTTGTTT ATTTTCAGAA GGAGCCTTTA TTGCTGTTTT 
    TTTTCTCTCT TCCTTGCTCC TTATTCACCT GTAAGAATTG GGAGCGGCAG
    ATTGAAGGCA AAGCGCAAGT GCTTTGCTTT TTCTTGGAGT GTTTCTCAGG
    AATATGTGTG AGTTAAGCTT TCAGTGAGGG TGCACCCAAC ATTTTAAGGA
    ATTTTTTTTA TAACTTCTAC CATTCCACAT TCCCAGTTTT ATCCCTGTTC
    TTCACACCAG TCTATGCAAA TGAGATTCAC TAAAATGAGC TGGGGAGCTG
    CTGCCCGAGG GATCCAGACA GCCACAGGGT TTGTTACAAG CGTCAATACA
    TGGGCTGAAT TCTTCAATTG TCTGAGCTCA GCCATTTCAT CTGCATGCTC
    TTGGATCAAC ATTCATCAGA AACCACAGAA CGATTTTGTA AAGGAAGAAA
    TCCAGCATCT GCAAAGCGAT TTATGGCAGC TACAGACAAC TCTGCCAAAA
    ATGCGCAACC TTGTTGAGAT ACTTGAGTGG CAAATCTATA AAAAACCAGC
    TGCAGAACTC CTCCCACATA TCAAGGATGC ATTGCTAGAT GCTGAAGACA
    TCATTGATGA ATTTAATTAC TATGAGCTCA AGGCAAAGAT AGAGGGGAGA
    ATAGAGGAAT GCCTAACATC GTCTGGATGC CAGGAATTCT ATATGAGTGT
    CATTCGAGGA AGCTTTAACA GAGTGAAAGA AATCCAAGAG AAGCTAGACC
    ATCTACATCG TCAGTCTATG GACTTGGGCT TGCATTGTGC AGCACAAAGA
    TTTGACAAAA TTGTTAGGCC AGAAACAAGT TCTTTTCTTA ACAGTCAGAT
    TTTTGGACGG CAAGAAGAAG AGAAAATGGT GTTGGAGTTG TTAGGAGTAC
    AATTACAAGC TAATGCTGGC TACAAACGCA AGCGAAGCAG TAGAGTGGAG
    GTCTTGCCAA TTGTTGGACT GGGAGGTGTA GGAAAGACTA CTTTGGCCCA
    ACAAATTTGC AAGAATCAAA TGGTGAAAGC TCACTTTGAT ATGATCCTTT
    GGGCATGTGT ATCAGATGAC TTTAACGCAA AGAGGTTAAC TAAAGAGGTA
    ATCCAATCTT CCAAGAAAGA AACATCATTT GACAATTTGG ATTCTCTTCA
    GTCTATTTTA AAAGATACTG TTGAGTTAAA AAGGTTTTTA CTTGTACTAG
    ATGACATTTG GGATGATGTC ATGGCAGATG GTGGGCAAGA TTGGCAAAGG
    TTTTGTGCAC CGTTGTCAAA TGCTCTTCAA GGAAGCATGA TTTTGATCAC
    CACCCGGTCA CAGAAAGTTG CTGATAAGGT GCGGACAATG GATTGTTTTC
    CATTAGAAGG TCTAACTGAA GATGTTTTCT GGGAATTTTT CATTGTACAA
    GCATTTGGAA CTGAGAGTTT ATCCAAATAC CCAGATCTGG AGGACATTGG
    TAGAAGCATA ATTCTGAAAT TGAAGGGTTC TCCGTTGGCT GCCAAAACTA
    TTGGGCGTCT TTTGAGGACT AATTTGCATG CTTCACACTG AAATAACATA
    TTGCAGAGTG AACTATGGAA GTTGGAGCAG GACAGGACAG ATATTCTACC
    TGCCCTGCGT TTGAGTTATA TGTATTTACC ACCCCATCTA AAGAGGTGTT
    TCTCATTTTG TGCTGTGTAC CCCAAAGACT ACAGGTTTGA AAAGGATACC
    CTAGTCGACA TATGGCTGGC AGAAGGTTTC GTTGAACATG CAAGTAGCTT
    TCCAACTGTA ACTGTTGTGC AGCAATATTT TGAAGAGCTT CTAAGCCGAT
    CCTTCTTTCA GAAAGTGACG CACGGCAAAT ATGTGATACA TGACTTGATG
    CATGATATGG CACAGCTAGT TTCGCAAGAT GAATGCTTCA TCATAAGGAA
    TGCAAATGAC CTTCGAACAA TCCCTTCCAA TGTTCGCCAT CTATCAATTT
    TCACAAAAAG ATATATTGGA TGCCATGATT TAATGGGACT ATGCAGGTAT
    AAGAAACTGC GCACCCTTTT GTGCAGTAAA GCTTTTATCA AAGGTGAGTT
    TGCTTCTGTA CTTGGCAGCT GGTTTAAGGA GCTTCAACAC ATCCGTGTGT
    TGAGTTGTTC TCTTCCCATG ATAGTAGATA TACCTGAGGG CATCAGCAAC
    TTAAAGCTTG TCGGCTACAT TTACTTCTCA AGCCAACGTA CTTTCAGCAT
    CCTTCCTTCG TCATTTTGTT GTCTATATAA CCTGAAACTC TAGATGCTTC
    AACATGTGTT TTCAGAAGCC TGCCTTGTGA CTTTGGAAAC CTGATCAGCC
    TAAGGAAATT TAGAGCGAAA AATTTCAGTT ATCTCCCAGG AGAGGATTCA
    CGCATGCAGT TTCTAAGAGG AGAGAGAATC AAAGTGTTGA AATATGTAAA
    TCAGGTACAG GGAAGTTTGC TTGTCAATTT GCCTGGTCTC AAAAGTAAAA
    AGAATATTGG CCTTACTGTG TTGAAAAAGG AGAATAATCT CTACTCTCTC
    CATATATCTC AATTTGCAGA GGATGCTAGA TATGAACAGG AACAATTGGA
    AGTCTGTGAA AACCTACATC CTCATCCGGA TCTTCAACAT TTGGAGGTCA
    CTGGTTACCA AGGAGAGAAT TTTTGTCCTA GCTGGTTCCT GCCTGACAAC
    TTACCAAACA TGATATCGCT TATATTTGAG GAGTGCCATA ATGCTAAGAA
    GATATCATTG CATAGATTAC CATGCACAGG ATTCCAGTAT TTGATTAACC
    TGTACATCAT CGAATGCACA AATTTATCAA GCATCGAACA ATTTCTGCAA
    CCATGTCATA TACCGGCTAT CAAAATGATA AGCATAAAGG GATGCCAGGA
    GTTATCGTTG ATATCAGCTG AAAGATTTGG AGGTTTTCGT TTCTTAGAAG
    CTTTGGTGAT CCGTGATTGT CCAAGAATCA GTTGGGAAAA TGGGCTGGCA
    TTGCCGCCCA CTCTCACAAG CCTTTCGTTG GTGAGGTGTG GGGATATTTC
    TAAGTGGATA CCTGACTGTC TACTGAACCT ATCCTCCCTT GTCCGCCTGC
    AGTTGGTTGG GCTTTCAGGG ACAATGTTTA TTCCTGGGAG TATCTGGAGG
    AATAATCTTC CATTGCTAGA TTACTTGGAG ATCTGTAATT TCCAAGAGCT
    TCGTTTTACT GGTGTACCAG AAGCAATTGA AGAAATAAAC AATGTGCTTA
    TTGACAAGTG CCCAATGCTG AAAGAACTAA AGCAGCCTTT CTCCAGAGGT
    GATGTTACCT TCTTGTGGGG GATTCCGACT AGTAAATGGT ACTTGTCTTA
    ACTGATTCCT TTCATCGAAT TACCGTGTGT TATACTAAAG ATTGGGGTTT
    GCTAACTTTA AGTCATGTAA AAAGTTGCTA ATTTTTCATC ACCTAAAATT
    ACAGATTTCT AACCCC

    Gene models with high sequence identity

    1. AT3G14470.1 [+] show detail - NB-ARC domain-containing disease resistance protein
      E-value: 2e-72; Score: 271.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily RNI-like 0.0000000000000085
    superfamily P-loop containing nucleoside triphosphate hyd 0.00000000000026
    superfamily L domain-like 0.00000018
    HMMPfam NB-ARC 1.2e-45
    HMMPfam NB-ARC 0.00000000000098
    Gene3D no description 0.00036
    FPrintScan Disease resistance protein 0.00000000000016
    FPrintScan Disease resistance protein 0.00000000000016
    FPrintScan Disease resistance protein 0.00000000000016
    HMMPanther F-BOX/LEUCINE RICH REPEAT PROTEIN 0.000012

    See the detailed result >

    AT3G14470.1

    Model type
    Protein coding
    Short Description
    NB-ARC domain-containing disease resistance protein
    Computational Description
    NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: protein binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT3G14460.1); Has 25652 Blast hits to 19792 proteins in 681 species: Archae - 38; Bacteria - 1467; Metazoa - 4997; Fungi - 304; Plants - 18213; Viruses - 0; Other Eukaryotes - 633 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR