K01815

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01815

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01815

Determination of introduced cDNA(s)

  • J033138E18 - Rice Full-length cDNAs - Original: J033138E18

    full reading [+] show sequence

    Nucleotide sequence: J033138E18 - full reading 
    GGCAGACACC ACACCACCAC CGCAACGGAA ACACGGTGAA CGCCTCGTCC 
    CGAAACCCCG GAAAGCCGGC GAGAGCTCGA GAAGTCGAGA CCAACCTCGC 
    CGAGCGGATC ACTCGCACTA CTCCCACCTC GCCGCCCGCC GCCGCCGCCG 
    CCGGGTTCCC GTGCTGCGCG CGCTTCGATC TCCTTCTCCT TCTCCTTCTC 
    GCGGCCGTTC TTGTGCGTGA GTGAGAGACA GTGAGGTGGT GGGAGACCCG 
    TGGGAAGGGA GAGGGGGGCG GAAATGGCGA AGCACTTCGT GCTCAACACC 
    GGCGCCAAGA TCCCCTCCGT GGGCCTCGGC ACCTGGCAGT CCGACCCCGG 
    CGTCGTCGGC AACGCCGTCT ACGCCGCCGT CAAGGCGGGG TATCGGCACA 
    TCGATTGCGC CAGTGCGTAC AACAACGAAA AGGAGGTAGG GTTGGCTCTG 
    AAGAAGCTAT TTGAAGAGGG TGTGGTCAAA CGCGAAGATC TGTTTATCAC 
    GTCTAAGCTA TGGTGTGATC ATCATGCCCC AGAGGATGTG CCTGAGGCAC 
    TAGATGCTAC CTTGAATGAC TTACAGCTTG AGTACCTGGA TCTTTACCTC 
    ATTCATTGGC CATTCAGAAC CAAGAAGGGA TCCAGCATTG GCAAACCTGA 
    AAGCTACTTA CCACCTGACA TCCCATCTAC CTGGGCAGCA ATGGAGAAGT 
    TATATGATTC TGGCAAAAGT CGTGCCATTG GTGTGAGTAA CTTCTCATCG 
    AAAAAATTGG GTGACCTGCT TGCTGCAGCC CGTGTACCTC CAGCTGTTGA 
    CCAGGTGGAG TGCCATCCTG GTTGGCAGCA GATGAAGCTG CATAACTTTT 
    GCCAGTCAAC GGGCATTCAT CTTTCTGCAT ACTCGCCGCT AGGTTCACCT 
    GGTTCAACAT TTATGAACGG CAATGTCCTT AAGGAACCCA TCATTATCTC 
    GATTGCAGAG AAGCTTGGCA AAACTCCTGC ACAAGTGGCG CTGCGCTGGA 
    ACATTCAGAT GGGTCACAGT GTACTCCCAA AAAGTGTGAG TGAAGAAAGG 
    ATAAAGCAGA ACTTAGATGT TTATGACTGG TCTATTCCAG AGGACTTGCT 
    TGCTAAGTTC TCGGAGATTA AGCAGGTTAG GCTGCTCAGG GGCAACTTCA 
    TTGTCAATCC ACAGAGCGTT TACAAGACCC ATGAGGAGCT CTGGGACAGG 
    GAAATTTAGG AGTTCCGTCA GTGCCAATCA CGCTTATTGA ACATTGATTG 
    TATTAGCAAA TTTACGCATA TTTAATGTTT GGTGGTTCAG TGCTCTCGAG 
    CTCCTCTGTC CTATGTAATG AAGTGCTTGA TCAGCAGCAT CATGTTCCCT 
    TGGAAATCCT TTTTACTGCT CCTCTGAATA AAACTGGAAT GCCATTTTGG 
    TGCTTGTGCT TCGC

    Gene models with high sequence identity

    1. AT2G37790.1 [+] show detail - NAD(P)-linked oxidoreductase superfamily protein
      E-value: 2e-131; Score: 466.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Aldo/keto reductase, conserved site 0
    HMMPanther Aldo/keto reductase 3.79997359309153e-113
    HMMPfam Aldo/keto reductase 1.40000000000001e-52
    PatternScan Aldo/keto reductase, conserved site 0
    HMMPanther PTHR11732:SF34 3.79997359309153e-113
    superfamily Aldo/keto reductase 4.1e-93
    Gene3D Aldo/keto reductase 1.09999184471398e-97
    PatternScan Aldo/keto reductase, conserved site 0
    FPrintScan Aldo/keto reductase subgroup 2.80000504261099e-55
    FPrintScan Aldo/keto reductase subgroup 2.80000504261099e-55
    FPrintScan Aldo/keto reductase subgroup 2.80000504261099e-55
    FPrintScan Aldo/keto reductase subgroup 2.80000504261099e-55
    FPrintScan Aldo/keto reductase subgroup 2.80000504261099e-55

    See the detailed result >

    AT2G37790.1

    Model type
    Protein coding
    Short Description
    NAD(P)-linked oxidoreductase superfamily protein
    Computational Description
    NAD(P)-linked oxidoreductase superfamily protein; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: oxidation reduction; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471), Aldo/keto reductase, conserved site (InterPro:IPR018170); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT2G37770.2); Has 24755 Blast hits to 24730 proteins in 2482 species: Archae - 413; Bacteria - 16802; Metazoa - 2096; Fungi - 1772; Plants - 1239; Viruses - 0; Other Eukaryotes - 2433 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR