K01824

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01824

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01824

Determination of introduced cDNA(s)

  • J023076E04 - Rice Full-length cDNAs - Original: J023076E04

    full reading [+] show sequence

    Nucleotide sequence: J023076E04 - full reading 
    GCTTTCGTCT CGCGGTGAGT TTTTGGTAGT TTAGTTTGAT ACACCACTTC 
    GTTTGATACC CTCGGCGACC GCGCGGCGGC CAGCGGGCGC ATCCATGGCG 
    GCGGCGGGAT CCATAGGCGT GTACAGGGCG GTGTTCGCGG CGCTGGGCGC 
    TCTCATGCTG GGCACCCTGG TGTACACCTG CGTCACCGAC GGCTCGCCGT 
    TTCGCCTCGA GCTGCTCACC CCGTGGTTGG TGGCAACACT GATTGATTTT 
    TATGTCAATG TGACTGCGAT TTCGACTTGG GTTATCTACA AGGAAGTAAA 
    TTGGATTAGT TCTTTCTTTT GGGTAGTTCT GTTGTACTGT TTTGGCAGTA 
    TTGCTACATG TGCTTATGTT GTTGTGAAGC TTTTTGAAAT AAAAACTTCC 
    GGACCTTCAC AAGATCCACT TGATCTTTTA TTCCTCAGGC AAGGAGATCT 
    ATCCGAAAGA AAGTCCTCTT TTGTCATAAT TGGGAGAATT ATTTTCAGCA 
    TTTTGGGGGC AATGATGGCT GCAGTCGTAA TTTATACTGT CATCACTGAT 
    GGACTACCTT TCAGGAAGGA CTTGTTGACC CCGTGGATGG CGGCAACCTT 
    AATTGACTTC TATATAAATG TCTTCGCAAT ATCGGTATGG GTTGCTCACA 
    AGGAGTCAAA CTGGATATCT ACTGCCATCT GGATATGCTT GTTAATATGC 
    TTTGGAAGCA TCACGACATG TGGCTACATT GTCATACAAC TTTTCCAAGT 
    GTCGTACCGA GACCCAATCT ATCATGTGCT ATTGAACTCT CATAACAAGA 
    GCCTCAACGC AGAGCAGGGA AGACTTCCAA GCATTATACC CCCTAGCTCT 
    GCCAAAGTAT GAAGAATATG TAAGCCATCT TTTGCCAGTT CTTTTGCAGA 
    CAGAATTCCA ATATGCAGGG ATTCAGATCA TTCTCATTTT GTTCTTTCTG 
    TTGGAGTTAG AAAAATCTTT GCTTCGGCAT ACTCTCAAAT ATAATAGCTT 
    TGAATTCTGG ACCCCTGG

    Gene models with high sequence identity

    1. AT1G22750.2 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 2e-54; Score: 209.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G22750.2

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1475 (InterPro:IPR009943); Has 185 Blast hits to 155 proteins in 21 species: Archae - 0; Bacteria - 8; Metazoa - 3; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR