K01922

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01922

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01922

Determination of introduced cDNA(s)

  • J013058B22 - Rice Full-length cDNAs - Original: J013058B22

    full reading [+] show sequence

    Nucleotide sequence: J013058B22 - full reading 
    GACACACGCT GTGCTGCTGC TGCTGCCGCT GCTCCTCCTC CTCCTCTTAC 
    ATCCCACCCT CGCCGCGATT TCCTTCGCCG CCGCCGCCGG CTTCGTCTTC 
    TTCCCCGGCG CCGGGGCACG CGAAAAGGGT TTGTTTCTAG TAGAATATGT 
    CGTGCTTTGC ATGCTGTGGT GATGAAGATA CTCAAGGAGT ACCAGACAAC 
    AGGAATCCAT ACCCAGGGAA CCATCCAGCA AGGAGCGATG CATATCGCAC 
    AGCTGATCCA ACTCCAAGAG GTCCTCAACC TGTGAAAGTG CAACCAATTG 
    CAGTCCCCAT CATTCCTGTT GATGAAATTA GGGAAGTGAC TAAGAATTTT 
    GGTGATGAAG CTTTGATTGG TGAAGGTTCC TTTGGCAGAG TGTATTTTGG 
    TGTTCTAAGA AATGGTAGAA GTGCAGCGGT CAAAAAGCTA GACTCTAGTA 
    AGCAGCCAGA CCAAGAATTT TTGGCACAGG TATCTATGGT GTCGAGGCTT 
    AAGCATGAAC ATGTTGTTGA GCTGCTTGGT TATTGTGTTG ATGGAAATCT 
    CCGTGTCCTT GCTTATGAGT TTGCGACTAT GGGTTCTCTT CATGATATGC 
    TTTATGGAAG GAAGGGTGTT AAAGGAGCTC AACCTGGTCC AGTCTTATCA 
    TGGGCACAAC GTGTGAAGAT AGCTGTTGGG GCAGCAAAAG GCCTGGAGTA 
    TCTTCATGAG AAAGCACAGC CTCATATCAT ACACAGGGAC ATCAAGTCCA 
    GCAATGTTCT CCTTTTCGAT GATGATGTTG CTAAAATAGC TGACTTTGAT 
    TTGTCAAACC AAGCTCCTGA CATGGCAGCT CGGCTTCACT CTACTAGGGT 
    TCTTGGAACC TTTGGATATC ATGCACCTGA GTATGCAATG ACTGGACAGC 
    TTAGCTCCAA GAGTGATGTG TACAGTTTTG GAGTTGTTCT TCTTGAGCTA 
    TTGACCGGAA GGAAACCTGT TGACCATACA TTACCAAGGG GACAGCAGAG 
    TCTTGTGACT TGGGCCACCC CAAGGCTTAG TGAAGACAAG GTTAGGCAAT 
    GTGTTGACTC AAGACTTGGA GGGGACTATC CTCCTAAAGC TGTCGCAAAG 
    TTTGCAGCTG TTGCGGCGTT ATGCGTTCAG TATGAAGCGG ACTTTCGACC 
    AAACATGAGC ATTGTCGTGA AAGCGCTGCA ACCCCTGCTG AATGCTCGGG 
    CAACTAACCC TGGAGAAAAT GCCGGGTCAT AAAACTTTGG TCTACCTTTT 
    GTATGATAGA TATTAAGTTA AGAAGTATGA GACATCGATA TTGTTCTTGC 
    GGATGTGTGG CTGGCTGGAA GTGTGTACAT TTGTGATTAT TCGTCCCTTG 
    TTGTAATCAC CAAGGTTCTA GCAACCGAAA ATATTTGATT CTTCGCATCG 
    GGTGAGACAT AACTTGTCTG AAGGTGACAT GCATATCTAT CTACCTTACT 
    CAAGAGGGAA AACAAAATTC TGCATCTTGA ACTGAACTGA ACTG

    Gene models with high sequence identity

    1. AT2G47060.2 [+] show detail - Protein kinase superfamily protein
      E-value: 4e-155; Score: 545.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 9.7e-20
    Gene3D no description 1.9e-49
    HMMPanther SERINE/THREONINE SPECIFIC RECEPTOR-LIKE PROTE 3.1e-215
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 3.1e-215
    superfamily Protein kinase-like domain 1.8e-77
    HMMPfam Serine-threonine/tyrosine-protein kinase 2.3e-46
    ProfileScan Protein kinase, catalytic domain 36.796
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    HMMSmart Serine/threonine-protein kinase domain 4.1e-28
    HMMSmart Tyrosine-protein kinase, catalytic domain 8.6e-35

    See the detailed result >

    AT2G47060.2

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Computational Description
    Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G62220.1); Has 112106 Blast hits to 110861 proteins in 4523 species: Archae - 111; Bacteria - 13175; Metazoa - 41722; Fungi - 8890; Plants - 31792; Viruses - 347; Other Eukaryotes - 16069 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR