K02019

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K02019

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Shape::zigzag)
  • abnormal (PATO:0000460)
    (Stem::Others)
stem internode (PO:0020142)
  • increased length (PATO:0000573)
    (Stem::Shape::long internode)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K02019

Determination of introduced cDNA(s)

  • J033027C02 - Rice Full-length cDNAs - Original: J033027C02

    full reading [+] show sequence

    Nucleotide sequence: J033027C02 - full reading
    GACGATTCGG TGAGTCTGTG AAGAGGAACC GACCAAGCAA ACCCTAGCCG 
    CCGCCGCCGC CGCCTCCGCG TCCGCCTCCA GATCCGGCCG TCGGCATGGC
    GATGCGCGCT CTGGTCTCCA AGCTGAGGGT CCCCGCGGCT GCTTCCCGCC
    GGGCTCTTCC GCCGTTTCGA TCCTTCTCCG CCGCCTCTCA GGATAAGGTT
    GGCGGAACTA CTGCACGCGC TGCCGCTAAA GAAGGGACTC CAATTTCTGA
    TAATAGCAGG AAGGTCGAGA AGTTCTACAG GAAGCTGCGA TGGTATCAAG
    CCCTTGGCAA CTTCCTTGGG TTCAACACTT CAGTTTATTT ATTCTATCGC
    TACCACTACA CCTAAGCTAA GGAGGAGCAA ACTTAGTACT CTGATTGTCA
    CTCTATTTAT GTATCCATAT ACCACCTAAG TACTGAACAC TCAATTGCAT
    GTATGAGTAC GTACTTAGTA CTCTGATTGT CACTCTATTT ATGTATCCAT
    ATGCCACCAA AGTACTGC

    Gene models with high sequence identity

    Not founds.

     

    InterPro Scan Digest

    See the detailed result >

  • J023044A22 - Rice Full-length cDNAs - Original: J023044A22

    full reading [+] show sequence

    Nucleotide sequence: J023044A22 - full reading
    GCCCCGCGTC TCCTCTCCTC CCCACCCGCC CCGCATCTCT CCATCGGCCG 
    GATCGGCAGG AGAGCGCGGC CGTACGCACG TACGCCGTCC CCGCGGTTTC
    TTCCCCCCCG GCGCCCAGCC CGCCCGCCGG GCGGCGGCCT CTCCTAGCAA
    CTAGTAGGGG ATGGGCGTGA TATCTCGGAA GGTCCTGCCG GCGTGCGGGA
    GCCTCTGCTA TTTCTGCCCC GGGTTGAGGG CAAGATCAAG GCAGCCTGTT
    AAGAGGTACA AGTCGATCCT TGCTGAGATC TTCCCCAAAA CGCAGGATGA
    AGAACCGAAT GAGAGAAGGA TCGGGAAGTT GTGCGAGTAT TGCTCGAGGA
    ACCCTCTCCG AGTGCCCAAG ATCACGGTTT CCTTGGAGCA AAGGATCTAC
    AAGGAATTGA GAAGTGAACA GTATGGCTTT GCAAAAGTGG TGATGCTAAT
    ATACCGTAGA TTGTTGGTTT CTTGTAAAGA GCAGATGCCA CTATTTGCAA
    GTAGCTTATT AAGTATTGTA CACACTCTTT TAGATCAAAA GAGGCAGGAT
    GATATGCGCA TCATAGGATG TGAAACCTTG TTTGACTTTG CAGTTAATCA
    GGTGGATGGT ACATATCAGT TCAATTTGGA AGGGCTAGTC CCAAGACTAT
    GTGAGCTATC TCAAGAAGTA GGAGAGGATG AGCAGACCAT TGCCCTACGC
    GCTGCAGCCC TGCAAGCCCT TTCAGCTATG ATTTGGTTCA TGGGAGAGCT
    CTCACATATT TCATCGGAAT TCGATAATGT GGTTCAAGTA GTACTTGAAA
    ACTACCGACC TCAGAAGATG CAAAATGATG GTCAAGTTAC CAAGGATTCA
    AGCGACCAGT TGGAGCAAGA AGCCCCCAAA ACGGAGGACT CCAAAGCAGA
    GGACTCCAAA ACGGAGGACT CTTCCCCCTT TGTCATCTCT GCTGTCCCCT
    TGTGGGAGAA CATAGTTAAT GTTAAGGGTG GAGTTAACCT TACTGTGGAG
    GAAGCAAAGG ATCCTAAGTT TTGGTCCAGA ATATGTGTGC ACAATATGGC
    TAGGCTTTCC AGGGAGGCAA CAACATTCCG TCGTATCCTG GAGTCTTTGT
    TTCGGTACTT CGGCAACAAC AGTTCATGGT CACCTGAAAA TGGACTTGCT
    CTGTGTGTAT TGTTGGACAT GCAACTGTTA GTGGAAAACG CAGGACAAAA
    CATGCACTTA ATGTTGTCTC TACTGATAAA GCATATTGAA CACAAGACCA
    TGGTGAAGCA ACAGGAGATG CAGCTTAGTA TCGTGGAGGT AGCAGCCACC
    CTAGCAGAAC AATCCATCGC TCAGGCTTCA GCAGCAACTA TAGGTGCCAT
    AAGTGATCTT GTCAGGCATT TGAAAAGGAC ATTTCATATT ACTCTCGGCA
    GCAAAGATTC GGAGCTAGTA AAATGGAATG AAAAGTTCCG AAAGGCTATA
    GATGATTGTC TAGGACAGCT GGCAAAGAAG GTAACTGATG CTGGACCAGT
    TCTGGACATG ATGGCCGTGA TGCTAGAAAA TATTGCTAGC ACTCCTGTTG
    TAGCTAGATC AACTGCAGCT GCTGTTTATC GTACAGCTCA AATAATTGCT
    TCTGTTCCAA ATATTACCTA TCAGAATAAG GTGTTTCCAG AAGCTCTGTT
    TCATCAGTTG CTCTTAACGA TGATCCACCC GGATCATGAA GCTCGAGTAG
    CTGCGCACCG CATTTTCGCT ATTGTCTTGG TCCCCTCTTC CGTTGCCCCC
    TCGATTCAAG CAAGTGTATC AGGTCAGGCT AAGAAACATG ACATGCAGAG
    GACACTCTCT AGGGCTGTCT CGGTGTTTTC ATCTTCAGCT GCCATCTTTG
    ACAAGTTGAA AAAGGACAAG CACTCAGACA ACTCACAAGG TGATAGCAGT
    GGCTTGCATA GTATCAGTGA AGAGTCTAGT AATGCCAAAC GTTCGAACCT
    ACCTGTGTCT CAAAGTCGCC GACGTAGCAT GAAAATTCCT AATTTTTCCA
    TGAAGAGGGG TCCTTCAATG GCTATGAGAG CTCCTTCAGT AGCCCTGAGA
    GCCCCTTCCA TATCTCTCAG AGTTACTTCG ATGTCTTTGA GAGCACCTTC
    CATGTCTATA AAGGCAGACC ATGGTTCCTC AAGCCATCCA GAAGATGAAA
    TGGAATCAGT TTTGCTGAAG CTGAGCAGTC GCCAGATCAC ACTTTTGCTT
    TCATCCATTT GGGCTCAAGC AACATCTCCT GAAAATACTC CAGCAAACTA
    TGAAGCCATT GCTCACACTT ATAGTTTGCT TCTATTGTTC TCTGGAGCCA
    AGGCATCAGT TTTTGAGGCT CTTACTCAGA GTTTTCAGGT TGCATTTTCA
    CTGAGGGGCT ATTCACTGAC TGAACCAGAT TCATTACCAC CATGTCGGCG
    CCGTTCCTTG TTTACTCTTG CTACAGCTAT GATCATTTTC TCTTCAAGAA
    CTTTCAACGT GTTACCTCTT ATTCCAATAT GTAAACAAAT GCTGAATGAG
    AGAACAGGTG ATCCATTCCT CCGTTTGGTG GATGAGTGCA AGCTTCAGGC
    TGTGAAAGAT TCCGTGGATG ATCCGTCGAA AATCTACGGA TCACCAGAGG
    ATAATACTAA CGCACTGAAG TCCCTTTCAG CGATAGAACT ATCAGAGAGT
    CAATCCCGAG AATGCATTGT CTCCACAATC ATGAACAACA TAACAAATAT
    GCTAGAGGCG GAGTTGAATA GTGTGAAGAA TCAACTGCTA AGCGATTTCT
    CTCCCGATGA CATGTGTCCA ACAAGCACTC ATTTTTTTGA AGCAACTGGT
    GATAACTCAT CACCAGGATC TCATGATAAT GATCACCATC CAGAGGCTGT
    GCTGATCGAC CTGGGAAATG ACCACGATAT CTTTGGGGAA GCTTCAGAAA
    GTACAGCTGC TTCTGCAAAT GCTGTGCCTG TAACAGATCT TCTGAGTATC
    GATCAGCTTC TTGAAACAGT TGTCACAGAC CCGGCACCTC ATACAGAACG
    AGTGTCTGTA TCAACAGACA TGCCATTCAA GGAGATGAGT AGCCAATGCG
    AAGCCCTCAC TGTCAGGAAA CATCAGAAAA TGGCCTCCTT CATGAGCTTC
    TCGCAGGATA TGACAATGGA TCCCATGGCA ACCAATCAGC CGTTCCAGAC
    GGATTTGTCC CTTTTCCATG ACCCATATCC GCCTCAGGTT GGGGTGCCGA
    ACACGAATCC GTTCGTCGAC GATAACCTGT ATGGTTACCC CCAGTACATG
    AACATGAACG AAGCCAATCC ACAGCCAACT TATGAGCAAG CCCAGCAACA
    TTTCCTGAGG TTGCCGGCAT CAAGTCCATA CGACAATTTT CGCAGGGCTG
    CTGGTTGTTA GAGGTTGAGC CTGCAGCAGC AAGTCTATCA TGCCACCAAG
    TTCTTCACAT AGATGAGCAA AGAAAAGAAA TCTCAAGCCG ATAATAAACC
    GAATGATGTG GCAATTTTCC GTTTATTTTG AAAGAGGAAT ATATGCATAT
    CCGTGTGCAT GGTCTTAGAG GGTCAACCGG ATTCAACACC CACTCGATTC
    GTTCTTTATG TATAGCGGTA TATACATATA TATAGGTTAA TTCTTTTTTG
    TTTGTTTTTG CCATTGCAAC GTGTAGAGAA GAAACTGTGG GGAGCAGTGC
    CTCTATCACG AGCTATACAT GTATGTGTGT ATGTAACTTG TGTCAAATGC
    TGCAAATTGG AGAGTATATC ATCACGGAAT TGGTGTGGTC TATGAGAAAA
    AGAGGTGTCT TTCTTGAACC AGAAAGAGAA GCCTCCCTGT TGACAACTTC
    AAATGTAATT ATCATTATGT AAATGGGAGC ACCATCTTTG TCC

    Gene models with high sequence identity

    1. AT5G21080.1 [+] show detail - Uncharacterized protein
      E-value: 0; Score: 842.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther UNCHARACTERIZED 1.9e-71
    superfamily Armadillo-type fold 5.3e-06

    See the detailed result >

    AT5G21080.1

    Model type
    Protein coding
    Short Description
    Uncharacterized protein
    Computational Description
    Uncharacterized protein; BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT2G41830.1); Has 304 Blast hits to 292 proteins in 85 species: Archae - 0; Bacteria - 4; Metazoa - 137; Fungi - 19; Plants - 133; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR