K02135

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K02135

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K02135

Determination of introduced cDNA(s)

  • J033107M13 - Rice Full-length cDNAs - Original: J033107M13

    full reading [+] show sequence

    Nucleotide sequence: J033107M13 - full reading 
    GAGCAGCCGC CCCCGCCCGC GGTTGCTTCC CCTCCCCACC ACGTCAAAAC 
    CCAACCCCAA CCATGATGCT CCTGCGCCAC CACCACCACC CCCACAGCGG 
    CGCCGCCACC ACCAGCAGCA GCTGCAGCGG CGGCGGCGGC TGTTAGAGAG 
    GAGGGCACAC ACCACCACCG ACACCGACAC GCTCGCCATG CCACCAAGCG 
    AGGCGGCGGC GTGAGGCGAC GCAGATCTGA ACGGAGGAGG AATAGGAAGA 
    AGGGAGGAGG AGGGGAGGGA GAGGAGTTGG AAGAGTTGGA GGAGGAGGAG 
    ATCTCTTTCT TGTTCCCGCT CGATGGAGCG GGGGGAGGGG AGGAGGGGAG 
    ATTGCTCCGT GCAAGTGAGG AAGAAGAGAA CGCGAAGGAA AAGCGATGGC 
    CCTGATTCAA TCGCTGAAAC CATCAAGTGG TGGAAGGAGC AAAACCAGAA 
    GCTCCAGGAG GAGAATAGCT CCAGGAAAGC GCCAGCCAAG GGGTCCAAGA 
    AAGGGTGCAT GGCTGGGAAA GGAGGTCCGG AAAATTCAAA TTGTGCTTAC 
    CGCGGTGTCA GGGCACGGAC ATGGGGTAAG TGGGTGGCTG AGATCCGTGA 
    ACCAAACCGT GGAAGGCGCC TATGGCTAGG ATCATTTCCT ACTGCGCTGG 
    AGGCTGCGCA TGCATACGAT GAGGCGGCAA GGGCAATGTA TGGTCCCACA 
    GCACGTGTCA ATTTTGCAGA TAATTCCACA GATGCCAACT CTGGCTGCAC 
    ATCAGCACCT TCATTGATGA TGTCTAATGG GCCGGCCACT ATACCTTCTG 
    ATGAGAAGGA TGAGCTGGAA TCTCCTCCTT TCATCGTGGC TAATGGGCCA 
    GCTGTGTTGT ATCAGCCTGA TAAGAAGGAT GTGTTGGAAC GTGTAGTCCC 
    TGAGGTGCAG GATGTTAAAA CAGAAGGGAG CAATGGCTTG AAACGTGTTT 
    GTCAGGAGCG GAAGAATATG GAGGTATGTG AATCAGAAGG GATCGTTTTA 
    CACAAAGAAG TGAACATAAG TTATGATTAT TTCAATGTCC ATGAAGTTGT 
    TGAGATGATA ATTGTTGAAT TAAGTGCTGA TCAGAAAACG GAAGTACATG 
    AAGAGTACCA AGAGGGAGAT GATGGGTTTA GCCTTTTCTC CTATTAGAGT 
    AGTAGTCATG CTGCGGGTCA ATAGGAATAT TTCATTCTAG CTGCTAGGGG 
    ATACTTCAAA TATCTGCAAC CTGAAGCTTT GTAGTCATTT ACGGTTTTCG 
    TCTTACTGGG TAATAGCTTT ATATATACTA TAAGCCAACT GGTACAAGAA 
    GTTGTACTGT GTGTTGAGTG CACTGTGGTA AAAATGAATC TATATTTAAT 
    GAGCTTACTC TGTCAATATT TTTGCTTATT TTAGTGTGGT TAAACTCAGG 
    TTAGATATTC AAAACGAGTG GCAGATACTT CAAAGACTTT AGGATCGAAT 
    TAAATTCTCA AACAGGTATA TTAGGAAGTT TATTTCTGCA TGCATAAAAG 
    TATGACAAAC TATGATAGTA CAAATTTGCA TGCATATGGA ATTTTAAATA 
    CTTAAACATA CTACTATCGC ATTATAGCGC TCTATGGTCA TTCAAAGTAC 
    CAAAAGATAC ATCATGGAGA TTTCATAAGG GGAAGTTGCA GACATTCTCT 
    GAATTCAAGC CTCCTTGTTT CACTGTGAAA GGTCTTCTGT TTGTTAGGCC 
    AGTAGGTCAG CCAAATCCAG CCTCTAATCT CCCAGTCCAT GGTCTTCCCT 
    AATGCTGCAC CACAGATCTT CCACCAGACG CTGTCTCCAT ATTCATCACG 
    TGCGAAAATG ACACCACCCT TCTTCGTGAA TGGGCGATAC ACGGTCGAGT 
    ACCTGTCACG AAACCAGGCC CGTGGCTGAA GCAGGGAGAG CTTGGAAGGC 
    TTTGAAGAAT AAACCTCCCT TCCGTTTACA CCATCATGGA GAAACCAGTT 
    CAAGGTTGTA GTGTTTCCAT GCACAGACTG TTCAAATTTC CAGGGTTTCA 
    TGGTCAGTGT GAGGCTTTCG CTGACCGATG CCTTTAGTCC AAATGTGTTT 
    GGGGGGTCGA ATGAACCTTC AATGCCCTTC TCAAGGCCAA ACTCATGCGT 
    GGGGTTGTCG GAGGACTTGC TGACTGAAAC CGACAGGACA TCTGATTGTT 
    GCATAGGTGT GATTTGCAGC ATAACACGTG ATGGAAAGTG CTTCTCCTCA 
    GAGCCATGTC CACGTTCAGT CATGAGGATC TCGGAGACCA AAGAGTCCAC 
    ATCACACCTG AGATGAATCC ACTGCGAGCT GAATCACACC TTCAAGTTGC 
    TGATAAGTAA GCGAGAAGAG AAGGCGCTCA TCCTGTGTTG GCACTGCAGG 
    ATCTTCCATG CTCATGGCAA TGAGTGGGCA GTATAGCTGG ACCTTCCAGA 
    GCCCACTTGC TGAAAGAGCA TATGAGAACA GTGGCGATGG CACCCCAAAT 
    GAATGGTGTG AGGATCGTTG CTCAACAATC CAGTTAGTCA CTGCAAGATT 
    CATTGTCTGC ATCCATTGCT CCTCAAGGTT TGCTCCCAAC ATTCTGACAA 
    AGGTCTTTGC AGCATCTTTG CACTTTGGCC CAGTCAGCTG AGTCCTCAGG 
    GATTCGAGGC ATCGACAGCG AAGAGCATGG GGAGCCTCAT AGATGCAAAC 
    TAGGAAGGCC AGGGACAAGA AAACTATGTT AAACACGTCC TTTAGATTGC 
    CATGAATCTG TGCCCTGGGA AACTGAAAGG ACAGCTTTTT GTTTGGTCCG 
    GATCTCAGCA CCCAGTCCAC AATGTCAACA AACAACTCTA ACATCTCTTG 
    TTCGTCTAGA GACTGCTGGG TGTATGATTT CAGGTGGACT GGTTTTGACG 
    TCCACAGAGA AATTGGCACA CGGTAATTTG CAAAGATGGA GAAGGTGACA 
    AAGGAGGGCT GGGTGGGAGG GGTTTTGACA ACTGATAGGT TCACCGATGG 
    CTGTGATGAT TCTGATGCTG ATGGTGTGGG GCAGATGCAA AGGGACATGG 
    CGTTGGAGCG CCATTGGGAG AACGGAGGCA GGTTGGTGAT CCAACCCCAT 
    ACATCAAGAG GTAAGCTGTG AGCCATTACG TTGTTGAAAA CTTGAGCTTG 
    TTTTGCAATG TGGGAGTATC CCAGTATTGG TGTGGTTTTA TAGATGGAAG 
    AGATGATGGT TCCTCAGATA AAATTTTGGC TCATCCATGA CTGAGTCTAA 
    TGAAGCACGG CATAATTTTT GGTAAAGCGG ATTCTTGGTT GTTAGAAGAG 
    GAAATCAAGT CATTGAGCTG AGGAATCTTT GTTGTTAATT GGAGTTTGAA 
    GAATCTTCAT TTGTGCTTTG CACAGGTGCT AAAGCCAAAA GTTAACTGCT 
    ATACGGTAAT ATGATATATC AAACCCAAGT TGGTTGGCTA ATGTTGTAGT 
    GAAGAGAATA TAACGTGGCT CTAAACAGGA AAGCTGGAAA GAACGATATG 
    GTTGGGTGGA ATGGATTAGT TTGGATGGAT TCTGGATAAC TCGGTTCAAT 
    AAGGGCCTAA CGACACCAAA TTTGTGACTT GAAGGTTAGC TTGTGTGTCG 
    ACTGGGAATT GGAACCTGAT GCATCTCACT CTTTGCTTCC GTTCCGTCAA 
    GCTTCAAGAT TTACCTCTCA ATCGAGTATT GCTTTATACG

    Gene models with high sequence identity

    1. AT2G40390.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64190.1); ...
      E-value: 4e-128; Score: 231.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily DNA-binding, integrase-type 7.4e-22
    HMMPfam Pathogenesis-related transcriptional factor/ERF, DNA-binding 3.9e-15
    Gene3D Pathogenesis-related transcriptional factor/ERF, DNA-binding 7e-21
    HMMSmart Pathogenesis-related transcriptional factor/ERF, DNA-binding 2.3e-31
    FPrintScan Pathogenesis-related transcriptional factor/ERF, DNA-binding 2.9e-08
    FPrintScan Pathogenesis-related transcriptional factor/ERF, DNA-binding 2.9e-08
    ProfileScan Pathogenesis-related transcriptional factor/ERF, DNA-binding 21.43

    See the detailed result >

    AT2G40390.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64190.1); Has 75 Blast hits to 75 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR