K02211

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K02211

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K02211

Determination of introduced cDNA(s)

  • J033135A20 - Rice Full-length cDNAs - Original: J033135A20

    full reading [+] show sequence

    Nucleotide sequence: J033135A20 - full reading
    GCCTAATCAC CCAACACAAT CTTGCCATAC CATGGGTCGA TCGAAACGGG 
    AAGTTGCCCC GCCACCTCAA GCTTTGCCGG CATCCTTCCC ATCTGGCATG
    TGGCTGGCTA CTCCGCCGAT GCAGGCCTCC TTTGCTCCCG GTGGCTGGCA
    AGGTACAGCG GCTGCACCTG GTGGCTGGCA AGGTATGGCG CCACCGCAGC
    CGCCGCAGGC TCCATTATTT GCATACGGCG CCAATACTTC TGCTCCCCAT
    CTGGCCCAGA TGAAGCAAGG GTCAGATCGT AGTTCCATGG ACGATTCCTT
    GTCAGATCTG CAAGAAAGTG GTATGGACTC ACGTCCACCT GGTGGATTCT
    TAAGTTACTT TCAGGATCCA TCAAGTTTAC AGAATCATCA ACCTTCTATA
    CCACTAAATT ATTATGCTAC TCAGCAAGCA GCACCATGGG CACCTTCACC
    TGCAGAATAC CGAAGTCCAG TTACAAAATC AGGTCCAGGA GAACAACACC
    CTATCAACAT TGATAGTGGT GGTGAAGAAA CCCCCACTGT TAGGACTGAG
    AAGCGGTTGA CATGGACACA TGAAGAGGAC ATAAGGCTAG TGAGTGCTTG
    GTTGAACAAC TTGAATGATT CGATCAATGG TAATTTCAAG AAAAATGATT
    GTTATTGGGG AGATGTTACA ACTGCCTACA ATAGCACCAC TCCGAGAAAT
    AGGATGAGGC AAGAAAAACA AATCAAGGAC CGCTTTCATA AAATTAAGAA
    AAATGTTGGC CGTTTTTGCT GTGCTTATAA GGAGGTGAAA TCTATCTATG
    TTAGTGGACA AAATGAACTA CAATTGATGG AGAAGGTCCA TGCAACATAT
    GAAGCAGATT ACAAGGAAGG CCAATTTACA TTTCTGCATT GTTGGAAAGC
    TCTCCGTGAC CAACCAAAGT GGCATGCTTA CTTGGAGGAA CTTGAGAAGC
    CAAACAAAAC AAAGTCAGAT AATGAAGTGG AAGTAAGGGA ACTTACATCC
    ACTCCTAATA GCCCTGAAGA TATTATACGT CCTGAAGGAA CCAAAGCTGC
    TAAGGCGCGG CGTAATGGTA AAGACAAACG CAAAAGGAAG GCAAAGGTTT
    ATCTATCGGA TATGGATGAT GAGATTGACA AGCCTAAAGA AGTTCAGAAC
    ATGGCAGATA AAGGTCGCGA TGAGCTACTG GAGACTCAGA GGCGTGTTTC
    TAGTGAGAAT CTTGAATCAA AAAGGTTAGC TCACCTGGCA GCCATGGAGC
    ACAAGGAGGC GGTTATGTTG GAAACATATC GGGCTCTCAT GTTGCAAGAT
    ACAAAAGATA TGCCTGATGA TGTCAGATTT GAGCATGTGA TGGCATTGAA
    GAGTATGAGG GAAAAGTTGT TTCCTAAAAC TAAGGTATCG AAGATGCTCA
    TTTTGGCTGC TTGTTTTGGC AGTGCTTCAG CAAGAGAAGC TACTTATTAC
    ATAATTTTCA GTAATCCACC GATTTTATCA AAACAGAACT TGTGTTCTAA
    CTATCTACTC AGTATGTCGT TGTATGGGTC ACTGTTATGG CCTATGAATG
    ATGTATGGAT CATTGTAATA GACTAAGTTC TTTTGTCAGT CTATGAACTA
    ATTAGTAGTT TTGCC

    Gene models with high sequence identity

    1. AT3G47680.1 [+] show detail - DNA binding
      E-value: 1e-21; Score: 102.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G47680.1

    Model type
    Protein coding
    Short Description
    DNA binding
    Computational Description
    DNA binding; BEST Arabidopsis thaliana protein match is: glutathione S-transferase THETA 3 (TAIR:AT5G41220.1); Has 545 Blast hits to 544 proteins in 20 species: Archae - 0; Bacteria - 1; Metazoa - 18; Fungi - 0; Plants - 496; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR