K02249

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K02249

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K02249

Determination of introduced cDNA(s)

  • J023020E22 - Rice Full-length cDNAs - Original: J023020E22

    full reading [+] show sequence

    Nucleotide sequence: J023020E22 - full reading 
    GACATTTCGT GATCGATCGA TTGATTTCGT GTTGTAATCT TGCGTGATCG 
    ATCATGGTGT GTCAATTAAT GGCAAGGGCG TGGTCATGGA GCCCCAGCCC 
    GGCTCGCCGG AGACCGCCGA GCTGCCCGCG CCTATGGTGC TAGAGCCGCC 
    GCCGCCGCCG TCAGATGAGG CGGCGGCGGA GGAGGAGGAG GCCGGCGTTA 
    AGCCTGATAG GCAATCATCT TCATCGTCTT CGTCGTCGTC GTCGGAGGAG 
    GAGAAGGAGG TGTCCAAGGA CGTCGCGGTA GAGACCAGCG TCGTCGTCCC 
    GTCGGTGGTC GCCGCCTCGC CGGACGATGA GGCCGCCGCC GTCGCTTCCG 
    GTGACGGCGG GGACGTTATC AAACACGACG ATGAGGCCGT GGTCAGACCG 
    GACGATTGGG CATCGTGGCC GCAGCAGCCG GCTCAGACCG TCGACGACGT 
    AGCGGCGGCG GCGACGACGA CGCCGCAGGC GGCGCCGGAG ATCCAGACGA 
    TGTCGCTGCA GCCGGCGGCG GTGGCGGGGT TCGATCCGGA GAGGATCCCC 
    AAGTCCATCT TCCAGGCGAA GCCCCCGGGG TCGTCGTCGC AGGCGGAGTG 
    GAGCGTGGCG TCGAACGAGT CGCTGTTCAG CATCCACCAC GGCGCCCGGC 
    CGTCCGGCGA CCTCTGCGGC TTCTACGCCG GCGAGAGCAG GTCGCATTTC 
    GACTACTTCT ACGACGAGGC CATGGCCGGC GCCGCCGGCG ACCACACGTC 
    GGACTGGAAG CTGGCCACCG TCGCCGAAGG GTCGCCTGGT GGCAGCGCGC 
    GGTCGGACGC CACCGACGGC GGCGGCGGCG CGGCCAAGCA AAAGGCGGCC 
    ATCGACTTCC GCCGCCACGA GAGCGGCTCC GCCGGCAGCT CGAGCAACTT 
    CTCCTTCGCC TTCCCCATAT TGGCGGAGAC GACGACGTCG CCGAGGAAGA 
    GGGACTACGG CGGGATGTAC CATCCGCTGA AGAAGGAGGC GGAGCAGCAG 
    CAGGCGGCGT CGCCGGCGTC GGCGTTCGAG GAGATGACGC CGGAGGAGGA 
    GCGGCGGCGG CGGCGGAGCT GGTGGTGCTG CTGCTGCGGC GAGTGCTGCG 
    GCTGCTGCTG GTTCGCCTGC TCGTGGTCGT CGTGCTGCTG CTGCTGCCGG 
    TGGCGGTGGT GCAGCCGCTG CAGCTGCAGC TGCCCAACCT TCTGCCGCCG 
    CAACTAGTGC CTCTCTGCTC CTGACCAAGA CATTTTTGGC GGGAAAAGAT 
    GAAGGGAAAA AACCGAGACC AACTCGGCTA ATCCTGATAC AGCCATAGTT 
    AAATTAATTA TTGCTACCAG ATTAGGCATC ACTGCATGAG AGGATCATAT 
    CATATGTATG CATGTGCAGA TGGGTAAAAA GATGAAGATG ATATTGTTCA 
    CTGTTGACAA GG

    Gene models with high sequence identity

    1. AT3G02125.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 3e-07; Score: 53.50

     

    InterPro Scan Digest

    See the detailed result >

    AT3G02125.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39200.1); Has 2247 Blast hits to 1434 proteins in 202 species: Archae - 4; Bacteria - 111; Metazoa - 942; Fungi - 239; Plants - 140; Viruses - 37; Other Eukaryotes - 774 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR