K02451

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K02451

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K02451

Determination of introduced cDNA(s)

  • J013156D16 - Rice Full-length cDNAs - Original: J013156D16

    full reading [+] show sequence

    Nucleotide sequence: J013156D16 - full reading 
    TGCCGGCAGC AAGTGAGCGC GGGGAGAGAG ACAGAAGCCG GCGGCGGCGG 
    GGCGAGATGG GGAAGAAGCA GAAGAAGCCC AGGAAGGGGA AGGAGAAGAC 
    GGAGCGGAAG ACGGAGCGGA AGACGGCTTC GGCGTCAACA CCTACACCTT 
    CGTCACCCGC GACGCCAAGG CCAGGTACGT CAAGTTCCAC TGGAAGCCCA 
    CCTGCGGCGT CAGCTGCTTG ATGGACGACG AGGCCACGCT CGTCGGCGGC 
    AAGAACCACA GCCACGCCAC CCAGGACCTC TACGACTCCA TCGCCGCCGG 
    CAACTTCCCC GAGTGGAAGC TGTTCGTCCA GGTGATCGAC CCGGAGGAGG 
    AGGAGAGGTT CGACTTCGAC CCGCTGGATG ACACCAAGAC ATGGCCGGAG 
    GACGAGGTGC CGCTCCGGCC CGTGGGGCGC CTCGTTCTCA ACCGCAACGT 
    CGACAACTTC TTCAACGAGA ACGAGCAGCT GGCGTTCGGG CCGGGGCTGG 
    TGGTGCCGGG GATCTACTAC TCCGACGACA AGATGCTGCA GTGCAGGGTG 
    TTCGCGTACG CCGACACGCA GCGCTACAGG CTGGGGCCAA ACTACCTGAT 
    GCTGCCGGTG AACGCGCCCA AGTGCGCCCA CCACAACAAC CACTACGACG 
    GCGCCATGAA CTTCATGCAC CAAGGTCTCC CCTGAGCTCC GCGCCATCTG 
    GGTCAACTAC CTCTCCCAGT GTGATGAGTC GTTGGGGGTG AAGATTGCGA 
    ATAGGCTCAA CGTGAAGCCA AGCATGTGAA GAAACTAAGG CACAAGAATG 
    CATCATCTCT TGTTAATTAA TTGGAGTACT ACCAACCAAA TAAGGCCAGA 
    CAATGTCAGA TGCACGCATC TTCTGTTGTC ATTGGGCCAT CTTTTGTATG 
    CATCCTATTG TTAATTACTA GTACATGATA TCCAAGTGAT CATCAGCAAG 
    GCTACAGAAA TTCTGTAATA CGATAAATTA AAAGAAACCA AAATGGAGCC 
    TGCATATGTG TAACTTAATT AATGTACTGG CGTATTAATG CCACTGCTGC 
    ATGTTGTAAT ACTC

    Gene models with high sequence identity

    1. AT1G20630.1 [+] show detail - catalase 1
      E-value: 2e-76; Score: 283.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Catalase related subgroup 2.4e-83
    ProfileScan Catalase, N-terminal 31.508
    superfamily Catalase-like domain, haem-dependent 3.8e-86
    Gene3D Catalase, N-terminal 2e-81
    PatternScan Catalase 0
    HMMPanther Catalase-like domain, haem-dependent 3.9e-132

    See the detailed result >

    AT1G20630.1

    Model type
    Protein coding
    Short Description
    catalase 1
    Curator Summary
    Catalyzes the reduction of hydrogen peroxide using heme group as cofactor. Protects cells from toxicity by H2O2.
    Computational Description
    catalase 1 (CAT1); FUNCTIONS IN: catalase activity, cobalt ion binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion, cytosolic ribosome, cell wall, peroxisome, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 2 (TAIR:AT4G35090.1); Has 6108 Blast hits to 6088 proteins in 1842 species: Archae - 22; Bacteria - 4283; Metazoa - 677; Fungi - 546; Plants - 461; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR