K02451

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K02451

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K02451

Determination of introduced cDNA(s)

  • J013156D16 - Rice Full-length cDNAs - Original: J013156D16

    full reading [+] show sequence

    Nucleotide sequence: J013156D16 - full reading
    TGCCGGCAGC AAGTGAGCGC GGGGAGAGAG ACAGAAGCCG GCGGCGGCGG 
    GGCGAGATGG GGAAGAAGCA GAAGAAGCCC AGGAAGGGGA AGGAGAAGAC
    GGAGCGGAAG ACGGAGCGGA AGACGGCTTC GGCGTCAACA CCTACACCTT
    CGTCACCCGC GACGCCAAGG CCAGGTACGT CAAGTTCCAC TGGAAGCCCA
    CCTGCGGCGT CAGCTGCTTG ATGGACGACG AGGCCACGCT CGTCGGCGGC
    AAGAACCACA GCCACGCCAC CCAGGACCTC TACGACTCCA TCGCCGCCGG
    CAACTTCCCC GAGTGGAAGC TGTTCGTCCA GGTGATCGAC CCGGAGGAGG
    AGGAGAGGTT CGACTTCGAC CCGCTGGATG ACACCAAGAC ATGGCCGGAG
    GACGAGGTGC CGCTCCGGCC CGTGGGGCGC CTCGTTCTCA ACCGCAACGT
    CGACAACTTC TTCAACGAGA ACGAGCAGCT GGCGTTCGGG CCGGGGCTGG
    TGGTGCCGGG GATCTACTAC TCCGACGACA AGATGCTGCA GTGCAGGGTG
    TTCGCGTACG CCGACACGCA GCGCTACAGG CTGGGGCCAA ACTACCTGAT
    GCTGCCGGTG AACGCGCCCA AGTGCGCCCA CCACAACAAC CACTACGACG
    GCGCCATGAA CTTCATGCAC CAAGGTCTCC CCTGAGCTCC GCGCCATCTG
    GGTCAACTAC CTCTCCCAGT GTGATGAGTC GTTGGGGGTG AAGATTGCGA
    ATAGGCTCAA CGTGAAGCCA AGCATGTGAA GAAACTAAGG CACAAGAATG
    CATCATCTCT TGTTAATTAA TTGGAGTACT ACCAACCAAA TAAGGCCAGA
    CAATGTCAGA TGCACGCATC TTCTGTTGTC ATTGGGCCAT CTTTTGTATG
    CATCCTATTG TTAATTACTA GTACATGATA TCCAAGTGAT CATCAGCAAG
    GCTACAGAAA TTCTGTAATA CGATAAATTA AAAGAAACCA AAATGGAGCC
    TGCATATGTG TAACTTAATT AATGTACTGG CGTATTAATG CCACTGCTGC
    ATGTTGTAAT ACTC

    Gene models with high sequence identity

    1. AT1G20630.1 [+] show detail - catalase 1
      E-value: 2e-76; Score: 283.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Catalase related subgroup 2.4e-83
    ProfileScan Catalase, N-terminal 31.508
    superfamily Catalase-like domain, haem-dependent 3.8e-86
    Gene3D Catalase, N-terminal 2e-81
    PatternScan Catalase 0
    HMMPanther Catalase-like domain, haem-dependent 3.9e-132

    See the detailed result >

    AT1G20630.1

    Model type
    Protein coding
    Short Description
    catalase 1
    Curator Summary
    Catalyzes the reduction of hydrogen peroxide using heme group as cofactor. Protects cells from toxicity by H2O2.
    Computational Description
    catalase 1 (CAT1); FUNCTIONS IN: catalase activity, cobalt ion binding; INVOLVED IN: in 7 processes; LOCATED IN: mitochondrion, cytosolic ribosome, cell wall, peroxisome, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Catalase related subgroup (InterPro:IPR018028), Catalase (InterPro:IPR002226), Catalase-like domain, haem-dependent (InterPro:IPR020835), Catalase, N-terminal (InterPro:IPR011614), Catalase-related immune responsive (InterPro:IPR010582); BEST Arabidopsis thaliana protein match is: catalase 2 (TAIR:AT4G35090.1); Has 6108 Blast hits to 6088 proteins in 1842 species: Archae - 22; Bacteria - 4283; Metazoa - 677; Fungi - 546; Plants - 461; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR