K02534

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K02534

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K02534

Determination of introduced cDNA(s)

  • J013070B16 - Rice Full-length cDNAs - Original: J013070B16

    full reading [+] show sequence

    Nucleotide sequence: J013070B16 - full reading 
    GAAGCTTCCC TCTACTGAAA GATGTACTGG TTTTGAGAGC ACTGAATCTA 
    CACATTATCT GAAAAATACT TTGCAATCTT GGCAAACTAG AGTTATAGTT 
    GTTCTCAACT TGCTTTCTTA TTGGTAAAAA AGTTGACTTT TGCCATCTTT 
    TGTGTTCTAA TTCACTTTTT GTATCTGTAT TTAATTTCTT GGACAGCAAT 
    GATGGAGTTC ATAGAGCTGG AGCTCTTCTT CATCCATGGC TTCTGCCGTT 
    GCTCCTGACA TCTGGCACTG GACCAGAAGC CTCCCCAACC CCAAGCACTG 
    GAGGGGAAAA TCCTACTATC TTCAAATCTG CAACTCTCCA TCAACAAACC 
    AGTCTCTGAA CCTCATCATC AGCTGGCACT CTGAAACCCA ATCCTTCAAT 
    CTGTCTTACT CCATCTGTGC TGAACACCAT GATCCAGTCT CACTCTGGAG 
    CTCCCATTAT TCCAGATTGA AATCTGTTAA TGGCTCAGAT TTTGCCATCC 
    ATTTCTCCAC GATATCATCT GCGGGGTCCT CAGGTATGGC CCTTACTCCA 
    ACAAGATGTC ACCCTTCAGG CTGCCAAATG TTCAGGTATC TGAAGATACA 
    GGCAAAATCT TCAACCTGGC AGCACTCACT CTTGCACTCA TGGTCTGCAT 
    CTACGAAGCT CCGTCCACCC TCCGACGAGA CCTCATCGGC ACGGTCAGTG 
    CGCAGCTGAT ACGCGGCGAC ATGTGGGGTG CTGCGAAGAA GCTGATGCTT 
    GCCATGGGGT CAGACATGGA GGAGCAGTGG ATGCGGTCAC TGAACCTCGC 
    AGTCACCAAC TGGATCATAG AGACTCGCCG GTCAGGTGGC ACGCCGGTGT 
    CGCCTTTCAC GGTCTTCTCC TACGCTGTCT CGGCGATCAG GCTGTGGAAG 
    GTGGAGCTGT ACTGCCCAGT GGTCGCCATG ATCATGGAGC ACCCGGCTCA 
    TCAGACGAAA GATGAGAAGC TGCAGTTCTC GCTGAACTAC CAGCATCTGG 
    AGGCCGTGAT CCAGTTCATC TACAGAGTCA CCTTCAGGGA GAACTGGATC 
    GACGTCACCG TCAACGTCGA CAACATAAGG TGCGACCTGA TCCAGCTGGT 
    GTCGGAGACG CTGATGGCGA AGCAGGGCTA CGGCTCCGAC GAGAAGCACT 
    TCCCGTCGCG GATATCACTG CAGCTGACGC CGCTGGTGCA GACGGACATC 
    CTCTCCCTGA CAGTGAGCCG GTCGACGGAC AACCCCGCCC AGGAGGTCGA 
    CACAGAGATG GGCCTCGACG CGACGCTCAG CGCAGCACCG GCGACCATCG 
    GCATCACCAT GTCGGCGCAC GAGACGGTGA CGAGGACACT CCGGCCATGG 
    AAGTTCGAGC ACTCGGTGCA CGGCAACACG GCGGCGCTGA ACTGGTTCCT 
    GCACGGCGGC GCGGAGGGCA GGGAGGTGTT CTCCAGCGAG CCGCACAAGC 
    GGGAGCTGCT CCAGCCGCGG TCATGGTTCA GGAACCGGTA CACCAACCCG 
    GGCAGGCCGT TCACCAGGGG CGGCGGCGTG ATCTTCGCCG GCGATGAGTA 
    CGGCGAGAGC GTTTGCTGGA GGATGCCCGC CGCGGCGGCG GGCAAGACGG 
    TGGAGTGGGA GATGAAGGGG AGGATATGGG TGACGTACTG GCCAAACAAG 
    AAGAGGACGC TGCATGTTGA GACCAGGAGG GTCGAGTTCA GAGAGCTACT 
    GCGTCTCACC ATCAGAGAGT AGACCAATTT GTCATCATCT GGTTTCATAT 
    TTGAAAATTG TTCTAATTTT TTTTAATGAT TACTTAATCA AGACTCTGAG 
    AATGTCTGCT TCTGTTATGG AATTCAAAAT TATGTTGGGC ACT

    Gene models with high sequence identity

    1. AT2G40390.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64190.1); ...
      E-value: 5e-121; Score: 48.50

     

    InterPro Scan Digest

    See the detailed result >

    AT2G40390.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64190.1); Has 75 Blast hits to 75 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR