K02644

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K02644

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K02644

Determination of introduced cDNA(s)

  • J033145P04 - Rice Full-length cDNAs - Original: J033145P04

    full reading [+] show sequence

    Nucleotide sequence: J033145P04 - full reading 
    GGGGACCTGT GGCTATCGCG GAAGGGAGCG GCGGCGAACC CAGCTCGGTG 
    AGTCGTCGTC GGCGGCGGCG GCGACGGCGA CGGCTAGGAC CACGTGACGC 
    GGATCAGCTC GGAGGCAGCG ACGACCCATC TCTGATCTCC CTCACGTTCA 
    GAGGCGCGAC CAAGCGTCGA GGGGGAGCGC TCGACGGCGA GAGTCATGCA 
    GGGGGCGCGT GTTAATCTGA AGGGGTGGCA ACAGGCTGCT GTTGCATTCG 
    GTTCTGCATT TGGGGCCTTG CTTGACCCTA GAAGAGCTGA TCTGATAGCT 
    GCTCTTGGGG AGACTACTGG GAAGCCAGCA TTTCAGCGTG TGCTTCAGCG 
    GATGAGGAAC AGTGCTGAAG GCAGGGATGT TCTCCTGGAG CGTCCTCGAG 
    TTATATCCAC ACAAGTTTCT CATGCCTGGG ACATGCCTCA GAACACATTT 
    GGTGCAGCAT ATGCTCAGTT CATGGGATCA AGGAACTTCT CACCGGATGA 
    CCGCCCACCT GTCCGTTTCA TGGATACAGA TGAGCTTGCG TATGTTGCGA 
    CCCGCGCCCG TGAAGTCCAT GACTTTTGGC ATGTGCTGTT CGGCCTTCCT 
    ACGAACCTGA TTGGAGAGAC TGCCCTTAAG GTCATTGAGT TTGAACAGAT 
    GTTCCTTCCA ATGTGCATGC TTTCAGTCGT TGGGGGCTCT GCGAGGTTCA 
    ATGAGAAACA AAGGACACTG TTTTTTCAGC ATTATTTCCC ATGGGCTTCA 
    AAAGCAGGTC TTAAGTGCAC AGATCTTATG TCTGTGTACT ATGAGAAGCA 
    TTTTCATGAA GATTTGGATG AAGTGAGGAG GAACTGGGGA ATTATACCAT 
    GCCCTGATCC CAAAAGGAGC AGTGTTTAGA CTTTTAGATC GGTACATTTT 
    GCATGAAAGA TGTCTGAACT TGGTTTTCAC TTTGTCTACG TTAGTATTAG 
    CTCTTCCCTT TCAAGAATAA TAGCAAGAGT TATGCTATTG ATACCTAAAA 
    AAACTAGTAA TTCTCTTTAA CTTAGCATAG CAACTAAGCT TGCAATGTTG 
    ATGTTCCCTT TAACAATAGT GTAGATGAGT TAATTACATT TTTATGTGTA 
    ATACTAGCTG AATGCCGGTA CTTCGCTATG GACAGAAGAA AACATATCAT 
    AATATTGTCT GAAATAAATA AAATTATATT TTCCGCG

    Gene models with high sequence identity

    1. AT2G03690.1 [+] show detail - coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein
      E-value: 2e-103; Score: 372.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Coenzyme Q biosynthesis Coq4 5.9e-89
    HMMPanther UBIQUINONE BIOSYNTHESIS PROTEIN 1.1e-53

    See the detailed result >

    AT2G03690.1

    Model type
    Protein coding
    Short Description
    coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein
    Curator Summary
    Ubiquinone biosynthesis protein COQ4 homolog.
    Computational Description
    coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Coenzyme Q biosynthesis Coq4 (InterPro:IPR007715); Has 675 Blast hits to 675 proteins in 251 species: Archae - 0; Bacteria - 141; Metazoa - 162; Fungi - 176; Plants - 60; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR