K02713

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K02713

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K02713

Determination of introduced cDNA(s)

  • J023039E14 - Rice Full-length cDNAs - Original: J023039E14

    full reading [+] show sequence

    Nucleotide sequence: J023039E14 - full reading 
    GAGCAACCGA AATCCCCTCC TGACCTCCTT CCTCCTCTCT CCCCGATTCC 
    CCCCACCCAC CCACCAAGCG CGTCGGAAGC GATGGCGTCG GCGGCGGAGA 
    TGCAGCCGCT GGCCCCGGCG GGCTACCGCC GGGCGCCGGA GATGAAGGAG 
    AAGGTGGACG CCTCCGCGGT GGACCTGGAG GCCGGCACCG GGGAGACGCT 
    GTACCCGGGG ATCTCGCGCG GGGAGAGCGC CCTCCGGTGG GGGTTCGTCC 
    GCAAGGTGTA CGGCATCCTC GCCGCGCAGC TGCTCCTCAC CACCGCCGTC 
    TCCGCGCTCA CCGTCCTCCA CCCCACCCTC AACGCCACGC TCTCCTCCTC 
    CCCGACCCTC GCCCTCGTGC TCGCCGTCCT CCCCTTCGTC CTGATGGTCC 
    CATTGTATCA TTATCAGCAC AAACACCCAC ACAACTTTGT TTACCTGGGT 
    CTGTTCACGT TGTGCTTGAG TTTCAGTATT GGTGTGGCAT GTGCTAACAC 
    TCAAGGGAAA ATTGTGCTTG AGGCATTAAT ATTGACCTCA GCTGTGGTTG 
    CCTCTTTGAC TGCGTATACT TTCTGGGCTT CAAAGAAGGG GAAAGAATTT 
    GGTTATCTTG GACCAATTCT GTTTTCTGCT CTTGTTTTAC TTGTTGTGAT 
    AAGCTTTATT CAGGTGTTCT TCCCATTGGG CTCTGGACCA GTTGCATTGT 
    TTGGTGGCCT TGGAGCTTTA GTTTTCTCAG GTTTCATCAT CTACGACACA 
    GAGAACTTGA TAAAGCGCCA CACTTATGAC GACTACATTT GGGCCTCTGT 
    TGAGCTCTAC CTTGACATCC TCAACTTGTT CCTTTATATC CTGAACATGA 
    TCAGGAGCAT GCAAAGTGAT AACTAGCCAG TCCATCAGCA CCAACCAGAC 
    GTATTGTCAA CTTGCTCAGT GACGTCAGTG TGTCCTGCTC TATTAAGTAC 
    TATTTTGAAC AGCGATCTAT ATAACCGTGA AAACCTCGTG ATGTATTTTG 
    CTGTCGTCTG ACTCAAAGGA TGAGACCGAA GTACAATATA TGTATAGTTT 
    TGGTTGTGTT GAGTATGACT GTCGGAAATG TGATCCCATG ATTGTGACGT 
    GGTGCC

    Gene models with high sequence identity

    1. AT4G15470.1 [+] show detail - Bax inhibitor-1 family protein
      E-value: 3e-65; Score: 246.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Bax inhibitor-1-related 1.3e-48
    HMMPanther GLUTAMATE-/ASPARTATE-BINDING PEPTIDE-RELATED 6.3e-104
    HMMPanther Bax inhibitor-1-related 6.3e-104

    See the detailed result >

    AT4G15470.1

    Model type
    Protein coding
    Short Description
    Bax inhibitor-1 family protein
    Computational Description
    Bax inhibitor-1 family protein; CONTAINS InterPro DOMAIN/s: Inhibitor of apoptosis-promoting Bax1 related (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: Bax inhibitor-1 family protein (TAIR:AT1G03070.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR