K02750

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K02750

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K02750

Determination of introduced cDNA(s)

J033044G18 - Rice Full-length cDNAs - Original: J033044G18

full reading [+] show sequence

GACAGTTGCA GGCTTGCAGC AGTGGTCCAG TGGATACGGA GGTGGTGGCA 
ACCGGAGATG ACGCCTCCGC CTCCGCCGCC GCGGCGCCCC GTGTGCGTGA 
CCGGCGCCGG CGGGTTCACC GGCTCGTGGC TCGTCAAGCT CCTCCTCTCC 
CGTGGCTACG CCGTCCACGC CACCCTCCGC GACCCAGATG ATCCCAAGAA 
CGCGTTTCTG AAGCAGCTGG AGAACGCTCC GGAGAACCTG CGCCTGTTCA 
AGGCCGACGT GCTCGACGGC GGCTCGCTGA CGGCGGCGTT CGCCGGCTGC 
GAGGGGGTCT TCCATCCGGC CACTCCCGTG CCGGAACACA AGACGGTCGA 
TCCGGAGAAG GAGATGCTGG CTCCTGCTGT GAAAGGCACC AGAAATGTGC 
TCGAGGCTTG CTCTGCTGCG AGCGTTCAGA AACTCGTCGT GGTCTCATCC 
ATCTGTGCTG TTTGCTTTAA CCCGAGCTTG CCTCGAGACA GGCTCATAGA 
TGAGACTTGC TGGTCAGACA AGAAGTCATG CAAAGAAAAT GAGAACTGGT 
ACTGTCTTGC CAAGACCGAA GCTGAAGAGA TGGCCCTGGA ATATTCAGAG 
AAAAATGGAC TGCATGTCAT TACGGTTTGC CCTGGCGTTA TCTTTGGGCC 
ACTGTTGCAG ACTGTGCTAC TCAACACCAG CAGCAAAGTT CTGCTCTACA 
TCATGAAAGG AGGCCCTGAT GCACTAAGCA ACAAATTCTT TCCCATAGTC 
GATGTCCGCG ATGTCGCCGA TGCTTTACTT CTAGTGTACG ACAAGGCAGG 
GCCATCTGAG CGATACATCT GTTCTCAAGA ACAAATGGAC ATGAGGGATT 
TGTTGGATTT GATGAAGAGC ATGTACCCTA ACTACAGCTA CACAGCCAAA 
GTGGTTGATG TGGATATGAC TACGAGTGTT GAATTGACAT CAGAGAAGCT 
GAAGAAGCTG GGCTGGAAAC CTAGGAAACT CGAGGAGACG CTTGTCGACA 
GCGTTGAATC CTACAAGAAG GCAGGCTTTG TAGATGACGA ACCTTGCCGG 
CTTCCCCATC TTTACCGTGC ACCAGATGCT CAGGAGTGAA CAGCCGGCGC 
CGTCTTGCTG CTACTGTTCT TGATCTAATT GTCACTGAAA AAAAAAGTTT 
CCAATAATAC TGTAATAGAT GAGGGATCAG GTGTTCCTGT CCAGTGTCCA 
CATTATCATC TGCTCTGTTC CATTAGTGAA TTGATTCAGC CTGTGATCAA 
TGACACAATT TATGCCTGGC AATAATTGAA TATTGTCTAC TGATTAAGAT 
GGACAATTGT GTGTGTAATT TTAATATATC CGCCACCCGA TT

Gene models with high sequence identity

AT2G33590.1 [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
E-value: 1e-95; Score: 347.00

InterPro Scan Digest

Program	Description	E-value
superfamily	NAD(P)-binding domain	3.2e-58
HMMPanther	CINNAMOYL-COA REDUCTASE	1.3e-125
HMMPanther	NAD DEPENDENT EPIMERASE/DEHYDRATASE	1.3e-125
HMMPfam	NAD-dependent epimerase/dehydratase	1.1e-26
Gene3D	NAD(P)-binding domain	4.1e-39

See the detailed result >

AT2G33590.1

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Computational Description: NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: coenzyme binding, binding, cinnamoyl-CoA reductase activity, catalytic activity; INVOLVED IN: response to cadmium ion, lignin biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NAD-dependent epimerase/dehydratase (InterPro:IPR001509), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G33600.1); Has 13062 Blast hits to 13044 proteins in 1974 species: Archae - 275; Bacteria - 5592; Metazoa - 467; Fungi - 894; Plants - 2514; Viruses - 60; Other Eukaryotes - 3260 (source: NCBI BLink).
Link: InterPro Scan - TAIR