K02839

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K02839

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K02839

Determination of introduced cDNA(s)

J033046P17 - Rice Full-length cDNAs - Original: J033046P17

full reading [+] show sequence

GAATTCTCTC CTTTCTCCCA CGCCCAAATC GCGCACTTCC CCTGTTGAGG 
AGGGAGGCGA CGTCGCCCGT CTCTCCGCGT CGGCTCCGGC GCCGACCCAC 
TCCCCTCCTC CGCCGCCATC CATCTATTCG CGCCGCACCG CCCGCTCAAC 
TCTTCCTTCG CGCAGGCGGC GGCGGTGGCG CAGGCGGCGT CTTCCTCCAC 
CTGATCCACC TCCACTTCCT CCGGACCGCA CAAGAATAAG AAGAAGAAGA 
AGTGCAGGTA CGGTGCAGGT GCAGATCCAA TTGCGAGCTC ACCTGCTCTG 
CCCTGCCCAC TACCAAGTAG TAGCCTCCTC CTCCTCCCCT TTCTCCCCAA 
CATCCCATCC CAAATCAAAG GCTACTAGAC TAGTGTTGGG GGAGATCCAA 
GAGATGGCGC GGAGCCCCTG CGACCTCCGC ATCCTCCTCG TCGCCGCCGC 
TGCAGCCTTC ATCTACATCC AAGTCCGCCT TTTTTCTACT CAGTCCCACT 
ACGCCGACCG CCTCGCACAA GCAGAAAAAT CCGAAAACCA ATGCACCAGT 
CAACTCCGCT CCTTGATCGA TCAAGTCAGC TCTCAGCAGG AGAAGATTGT 
CGCGTTGGAA GAGATGAAGA TACGCCAAGA CGAAGAACGT GTACACCTCA 
AGATTTTAAT CCAAGATCTC GAAAAAAGGA GCGTGCAGAC CTTAGTAAAC 
AACAATGTGG CTCCTGTTGC TGCTGTTGTT GTAATGGCTT GCAATCGACC 
AGACTATTTG CAAAGGACAG TTGAATCTAT CCTGAAGTAT CAGACATCAG 
TGGCTTCAAA GTTTCCACTA TTTATATCTC AGGATGGAAT AAATGGAGAA 
GTGAAGAAAA AAGCTTTGAG TTATAATGAA ATAACATATA TGCAGCATTT 
AGATCTTGAA CCTGTGCGCA CTGAAAGGCC AGGAGAGTTG ATAGCATATT 
ACAAGATAGC CAAACATTAC AAATGGGCCT TGGATGAGCT ATTCATCAAA 
CACAACTTTG CGCGAGTAAT AATTCTGGAA GATGATATGG AGATCGCCCC 
TGATTTTTTT GACTACTTCG AGGCTGCAGC TAAATTACTT GATAACGATA 
AGACAATCAT GGCCGTTTCT TCCTGGAATG ACAATGGACA AAAGCAATTT 
GTTTACGACC CAAAAGCTCT TTACCGGTCG GATTTCTTTC CTGGACTTGG 
ATGGATGTTA ACAAAGCCTA CATGGATTGA GCTGTCACCT AAGTGGCCCA 
AAGCTTATTG GGATGACTGG GTGAGGCTAA AAGAGGTACA CAGAGACCGG 
CAATTTATTC GCCCGGAAGT CTGCAGAACA TACAATTTTG GCGAACATGG 
GTCAAGCATG GGGCAATTCT TCAGACAGTA CTTGGAACCA ATCAAGCTAA 
ATGATGCCCA TATCAAGTGG AATTCTGAGG ACCTGAGCTA CCTCAAGGAG 
GACAAGTTCC TGATCCAATT TGGGAAAGAC GTCGCTAGTG CCACCCCTCT 
CCATGGATCT GATGCCGCGT TGAAAGCCCA CAATATGGAT GCGGATGTAA 
GGATCCAGTA TAACGATCAG GAAGACTTTG AGCGGATAGC TCGTCAATTT 
GGAATATTTG AAGAATGGAA GGATGGCATT CCAAGAACAG CTTATAAAGG 
AGTAGTAGTC TTCCGGTACA AGAGTAGTCG AAGACGAATA TACCTCGTTG 
GTCCGGATTC CCTCAGTCAG CTTAGGGTAT AGTGTTGTTG AGGTGTGGAG 
ATAGTTTCTC ATTGTTTCAG ATACAAGCGG CAGCACCTCA CCTGACCACT 
GAGCAGAGCT GACCTGCCTG ACATTTTGCT GTATATGTGA TTCATCACGT 
GAGATTCATA CATAGACGAC TTCCATTGCA CCGAAAGCTT AAACATC

Gene models with high sequence identity

AT4G38240.2 [+] show detail - alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative
E-value: 1e-178; Score: 623.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	Glycosyl transferase, family 13	1.5e-204
superfamily	Nucleotide-diphospho-sugar transferases	1.2e-107
Coil	coiled-coil	0
HMMPfam	Glycosyl transferase, family 13	8e-188
Gene3D	no description	3.2e-83

See the detailed result >

AT4G38240.2

Model type: Protein coding
Short Description: alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, putative
Curator Summary: Encodes N-acetyl glucosaminyl transferase I, the first enzyme in the pathway of complex glycan biosynthesis.
Computational Description: COMPLEX GLYCAN LESS 1 (CGL1); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 13 (InterPro:IPR004139); Has 453 Blast hits to 453 proteins in 90 species: Archae - 0; Bacteria - 4; Metazoa - 330; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Link: InterPro Scan - TAIR