K02841

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K02841

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • present in greater numbers in organism (PATO:0000470)
    (Rosette leaf::Number::many)
stem (PO:0009047)
  • increased thickness (PATO:0000591)
    (Stem::Shape::thick)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K02841

Determination of introduced cDNA(s)

  • J023108B05 - Rice Full-length cDNAs - Original: J023108B05

    full reading [+] show sequence

    Nucleotide sequence: J023108B05 - full reading 
    GAGCCTTCCG CTGCTGCTGG ACGAGTGGAT GACGAGCACT AGGCCCATCT 
    TGTTGTTTAT CCTTTTTCTG AACCTCACAA TGAGCGATGC TACTGAAATT 
    CAGCTGCAGA TTACAGGTGT CCGAGGCCAA GAAGACGTGG TAGCAGAGTC 
    TGACAAGAGC ACGTCTCGAG CAGATGGAAC TGCGGCGGCG GCGGCGGCGG 
    CGGCGCCGCT GCCGCCTGTG TCCAGCCAGC GGCTGCGGTG GTGGGCGGTG 
    GTCCTTGCCA ACATCGTGTT CGTCCTCGGC GGGCAGAGCG TGGCCACGCT 
    CCTCGGCCGG ATTTACTACG ACCAGGGCGG CGGCAGCTTG TGGCTGGCGA 
    CGGTGGTGCA GTCCTGCGGC GCGCCGCTCG CCGTCCCACT GCTGCTCTAC 
    TTCCGGCGGC CAGAGGCCTC CCCGGTGGCA CGTCCGCCGC TGCTCAAGAT 
    CGCTGCCATC TACGCCGGCC TTGGCGTCCT CCTCGCCGGC GACAACCTGA 
    TGTACTCCTA CGCGCTCCTC TACCTGCCGC TGTCGACGTA CTCCCTCGTC 
    TGCGCCACCC AGCTCTGCTT CAACGCCGTC TTCTCCTACT TCCTCAACAA 
    GGAGAGGTTC ACCGCGCTCG TGCTCAACTC CGTCGTGCTG CTCACCTTCT 
    CCGCCGCGCT CGTCGGCGTG AGCCACTCCT CGGAGGAGAC CAACAGCAGC 
    GTCCCGGAGG GCAAGTTCGC GCTGGGGTTC GTCCTGGCGC TGTCGGCGTC 
    GGCGGCGTTC GCCCTGATCC TGTCCCTGAT GCAGCTCACG TTCGACACGG 
    TGCTCAGGAG CAACGCGGCA CACGCCGTGC TGGAGCTGCA GCTCTGGAGC 
    AACGCCGCCG CGTCGTGCGT GTCGGTGGCC GGGCTGTTCA TCTCCGGCGA 
    GTGGAGCTCC CTGACGGCGG AGATGGACGG GTACAAGAAG GGCGAGGTGG 
    CCTACGGGAT GACGCTGGCG TGGACGGCCA TCTCGTGGCA GCTCGCCACG 
    ATGGGCATGG TGGGGCTCGT CGCGACGGTG TCGTCGCTGT TCACGAACGT 
    GATCAGCACG GTGGGGATGC CGCTGTCGCC GATCATGGCG GTGATCTTCC 
    TCGGCGACCG GATGGACGGT GCCAAAGTGA TAGCCATGCT CATTGGCATC 
    TGGGGATTCT TGTCCTACGT TTACCAGCAC TACCTCGATG ACGCCAAGAG 
    CAAGAACACA GCTGGGTCAG CTGACGTCAC ACAAACTTCA GAAGCAAAAC 
    TCTGAAGCCT GATACGCCTG ATAGTGATAC CCAGAGTGAA TTTTACTGTA 
    CTTGATCTCT TTTTTTTCAC GGAATCAATT GGAAATTTGG AATACTGGTC 
    TTATCTTCCC T

    Gene models with high sequence identity

    1. AT1G44750.1 [+] show detail - purine permease 11
      E-value: 4e-88; Score: 322.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Multidrug resistance efflux transporter EmrE 1.1e-07
    superfamily Multidrug resistance efflux transporter EmrE 0.00014
    Coil coiled-coil 0
    HMMPfam Protein of unknown function DUF250 1e-28

    See the detailed result >

    AT1G44750.1

    Model type
    Protein coding
    Short Description
    purine permease 11
    Curator Summary
    Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.
    Computational Description
    purine permease 11 (PUP11); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Drug/metabolite transporter superfamily protein (TAIR:AT4G08700.1); Has 428 Blast hits to 419 proteins in 52 species: Archae - 0; Bacteria - 15; Metazoa - 14; Fungi - 21; Plants - 366; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR