K02928

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K02928

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K02928

Determination of introduced cDNA(s)

  • J033079H04 - Rice Full-length cDNAs - Original: J033079H04

    full reading [+] show sequence

    Nucleotide sequence: J033079H04 - full reading 
    TGGTGGTGCC ACTGCATGGC AGGAGGCTTG GCATCATCAG CAAGCCATTA 
    GCCATGGATA AGGCAGGCGG CAGCGGCGAG GCGCCGCCGG AGCCGGAGCC 
    GGCGGCGGCG GCGACGGTGA AGTCAATCGT CGTGTACCCC ATCAAATCAT 
    GCAGGGGCAT CTCCGTGCCC CAGGCCGCCA TCACCTCCAC CGGGTTGAGG 
    TGGGATCGAC CGTGGCTGGT GATGAACTCC GCAGGGAGAG CCTTCACCCA 
    GCGAGTGGAG CCCAAGCTCG CGCTGATTGA GGTGGAGATG CCGCAAGAGG 
    CGTTCACTGA GTGGCAGCCA ACGCCTGATT CTCACATGGT TATCAGAGCA 
    CCCGGATTGG ATCCACTGAA GATCCCTCTT GGCGCGAAAC GTGCCACAGT 
    TGATGATGTC TCTATCTGGG AGTGGTCTGG TTCTGCGTAT GATGAAGGAG 
    ATGAAGCGGC CGAATGGTTT TCCAGTTACT TTGGGAAGCC GACTCGACTC 
    GTACGGTTTA ATGAAGCATC AGAAATTAGA GAGACCAATC CTGACTATGC 
    TCAAGGTTAC AAAGTTCTGT TTGCTGACGA CTTCCCATTC CTGCTGGCCT 
    CCCAGGGCTC AGTGGATGCA CTAAACAGTA TCCTTAAAGA ACCTGTACCA 
    ATGAATCGCT TCAGACCAAA TATTATAGTT GATGGATGTC ATCCATACTC 
    GGAGGATCTG TGGAAGACCA TAAAGATAGG GAAACTGACA TTTTTAGGTG 
    TCAAGTTATG TGATCGTTGC AAGGTGCCTA CTATTAATCA AGATAATGGG 
    ATTCCTGGTG AGGAACCAAC GGAAGCTCTA CAAGCACTCC GGTCTGATGA 
    AGTGTTGCGG CCGAGCCACA AAAATAAACG CCGGGTCTAT TTTGGGCAAA 
    ATTTAGTCTG CAAGGAATCT CTGTCGGCAA AAGATGAAGG AAGGATCATC 
    AAGGTCGGCG ATCCAGTTTA TGTTCTTGAG TCATTCCCTT CTTCAGATGA 
    AGTTCCAGCA TGAGCAAGGA GGGCACAGTG GCAACCGTTC AGAGGTTAGT 
    AATAGGTCGA TTTATGCGCG CATGGATGTA AATCTTACGC TGCAGATAAG 
    GCTTGAGAAA GTGTGCTATG TGCCAGAATA AACATTACCA TCTGGCACTG 
    AAAAATGTTG CCCATACAGT CGATGGTTTT TCAGTGATCA CTGTTGTGCA 
    GTTACCTGTA CTTTCACC

    Gene models with high sequence identity

    1. AT1G30910.1 [+] show detail - Molybdenum cofactor sulfurase family protein
      E-value: 3e-101; Score: 365.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Pyruvate kinase, beta-barrel-like 2e-09
    ProfileScan Molybdenum cofactor sulfurase, C-terminal 35.207
    HMMPfam MOSC, N-terminal beta barrel 4.7e-37
    HMMPfam Molybdenum cofactor sulfurase, C-terminal 1.8e-24
    HMMPanther MOLYBDOPTERIN COFACTOR SULFURASE (MOSC) 2.1e-71

    See the detailed result >

    AT1G30910.1

    Model type
    Protein coding
    Short Description
    Molybdenum cofactor sulfurase family protein
    Computational Description
    Molybdenum cofactor sulfurase family protein; FUNCTIONS IN: molybdenum ion binding, Mo-molybdopterin cofactor sulfurase activity, pyridoxal phosphate binding, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), MOSC, N-terminal beta barrel (InterPro:IPR005303), Molybdenum cofactor sulfurase, C-terminal (InterPro:IPR005302); BEST Arabidopsis thaliana protein match is: Molybdenum cofactor sulfurase family protein (TAIR:AT5G44720.1); Has 1932 Blast hits to 1913 proteins in 692 species: Archae - 10; Bacteria - 1072; Metazoa - 332; Fungi - 283; Plants - 100; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR