K03150

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K03150

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Adult plant::Plant height::short)
cauline leaf (PO:0000013)
  • desaturated green (PATO:0001272)
    (Cauline leaf::Color::pale)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • desaturated green (PATO:0001272)
    (Rosette leaf::Color::pale)
stem (PO:0009047)
  • decreased thickness (PATO:0000592)
    (Stem::Shape::thin)
  • desaturated green (PATO:0001272)
    (Stem::Color::pale)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K03150

Determination of introduced cDNA(s)

  • J033031H05 - Rice Full-length cDNAs - Original: J033031H05

    full reading [+] show sequence

    Nucleotide sequence: J033031H05 - full reading
    GTGTGTCGCC ACCCACAGCC TCTCCCCCCT CTCTGACGGC GCCGCCGCAC 
    GACACGACAA CCAACCGAAG CCAGCCTCTC CCGCCGCCTT CGCCGCCGCC
    ACCGTCGCCG CCGGACAGCA GTATAAATGG AAGTTGGTGC CAGCTCTATA
    ATGGAGGATG CCAACGGAGT AGTCGATTTG GATGTTGACA TTGTTGGCCT
    AGAAAGTGGT GCTGCTTGCA GCAAATTTGT CAAAACTGAA GATCCTGATG
    CTACAGAGTG TTCAAGTTCT TTTGGGGACA CTCTGTCAGG GTCAGAAGAT
    GATGCAAGGC CTTCAGAGAT TAGTGACATT GAGGTCGACT CACCTTTCTG
    CCGCTATCCT GCTAATGGTG ATGCTGCTGC TCTCATGGAT GCAGCTGTTT
    CCGACAATTT GGATAGATTA TTAAAGAAGA AACGGGTAAC TGATCACTGG
    CGAAAGTATA TCAGCCCATT AATGTGGAGA TGCCAATGGT TGGAGCTACG
    TATGAAGGAT TTGCAATCTC AAGTATCGAG ATATGACAGA CAACTTGCAG
    TACTAAAACA TGAGAAGGAG TTGCAGACAA AAATGATTGA GTTGGATTGC
    TCCTCATCGA GATCAGTACC CTTCTCTTCT CATTGCTGCA GGAAGACTAT
    GAAGAGGAGG AGGAGAAAGA GAAACGAGGA GAAAATGAAT GCTTCATCGT
    ACATCTCAAA TCACACTGTA TTCTCTTATT ATGAGAAAAC GGAAGCAGAT
    GCCTTTTCTA TTGATGACGA TGAGGACACA GATGAAAACA CCACAGTTAA
    CAATGAAACT GATTGGCTAC TTGGAATTAA GAGAGGTGAA GCTACTGTCG
    AGCAGATTCT TTTGAGCATT CAATCTGCTC AAGATAAAGT GCTTAGCCTG
    AGATCTAGTC TCAAGAAGGC AATGGCCAAA AAGAGTAAGG GAGCAATCCT
    TAAAGTCAAC ACACACATGA ACGGTGCACA GAGCTCAAGT TGCTCACCAG
    GAAAGGGTAA AGTGCTTGAA AGATCACCAA GGGACATGTC GGATTGTGAT
    ATGGATGATG CCGCCATGCC CGAGAGTGCT CTTTCAAGTT ATGGAGAAGC
    TAATGATATG GATATTTTTG AAAGCACCAT GAGCTTATTG TCGGCTGAAG
    TTCCACATCA GATGGGAGAA TTTCACCAGA GTTCTGAAGA TGTATTGATT
    GACAATCAAG CAGCTGAGGA AGGGTATCAG AACTTTGAGG TGATCAGCCA
    TCCATGCAAG CGCCTAAGGG TATCGGTCAA GAGAGAAAGC GGGGCGCACT
    CCGAGGATGA GAGTGTTGCC CCCACAGTCT CTGTGAAGAA AGAAGCTCAG
    GAAGAAGCCA CAACCAGCTT CGGTCTCCAG GCAGCGTTTT TTAAGCCCGG
    CTACACAGGC AAGCGGAGAA GGAGGATGCC TAAAATTCAA AGACGAGGCG
    GTTCATCCGC CTCTCCTTTT TCGTCTTGGA TTTCCTCTCG TATTCGTAAA
    AAGCGGCAAT TCTAAGGGGG GACTAGCTAC CTCAGACAAT CGATCTTCCA
    GTTTAGCTTC TGATCTGAAC TTTTAGTTAG ATGAGATGAT GACGGCAACT
    GCAGTTCTTT TCCCTTTCTC TTTGTACCTG ATATATTAAC GATGACATAT
    GAGCAATCTG GAAATGTGGC ACGATGGCTT CATC

    Gene models with high sequence identity

    1. AT3G59670.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37440.2); ...
      E-value: 4e-18; Score: 90.10

     

    InterPro Scan Digest

    See the detailed result >

    AT3G59670.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37440.2); Has 77 Blast hits to 77 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR