K03243

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K03243

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
rosette leaf (PO:0000014)
  • upturned (PATO:0002031)
    (Rosette leaf::Shape::hyponastic)
  • present in greater numbers in organism (PATO:0000470)
    (Rosette leaf::Number::many)
stem internode (PO:0020142)
  • increased length (PATO:0000573)
    (Stem::Shape::long internode)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K03243

Determination of introduced cDNA(s)

  • J023127G05 - Rice Full-length cDNAs - Original: J023127G05

    full reading [+] show sequence

    Nucleotide sequence: J023127G05 - full reading
    GTCTGCTCCT GAATCTCCTC CTATTGCCCT TCTGTCTCAC ATCCCTGTCT 
    CATAATTAAA GTCATAATTA AGGAGCTTCT CTAAGGTGAT TGGGACTTGT
    TGCAGGGATC AGGAGGAAAA CAACAAGGAT AACTTAAATT TTGGATTAAC
    AACAAGAGGA AGTGGATCAA CCAGACAAGA GGAAAACGTG CAAACAAGAC
    AGGCTTGCAA CATCACCTTG AGTCCAAAGC CAAGAAAGAT GGGGCTGTCA
    ATCTCATACC CACCAGACGA CTACCTGCCA GCAATGGAGG ACAACATGGG
    CAGGCTGTTC ATCCGGTCCC TCAGCTTCGA CGACGACATG GAGGCCGCCG
    CCGATGACTC GCCGTCGACA TCACCGATGC CATCACCGTC GGCGACATTG
    CTGCCGGCAT TCGGCTCCGG GGGGAAGCTG ATCATAGAGG GCTCCCTGAG
    CTTCAAGAGA AGAGAGGCTG ACCCGGTTCA GATGGAGACC ATGATATCCA
    TCAGGAGTCC CAAGTCTGAC AAGGAGAGCT GCAGCAGCAA GCCAAATGCT
    ACTGCTGGTG CATCGAGATT TGCGCTTGCC GGAGACCAGA CACCGGAGGA
    TTCTCCGGTG ATCGCCGGAG TTGCCAGCCC CAAGCACCAG GCAGCGGCTG
    TCAGGCTGCA GAAGGTGTAC AAGAGCTTCA GGACAAGAAG GCAGCTCGCA
    GATTGCGCCG TTCTTGTCGA GCAGAGCTGG TGGAAATTGC TCGATTTCGC
    ACTGCTCAAG CGGAATTCGG TGTCGTTCTT CGACATTGAG AAGCCCGAAA
    CGGCCATCTC GAGATGGTCT CGGGCAAGAA TGAGGGCTGC CAAGGTTGGC
    AAAGGTCTGT CCAAAGATGA GAAGGCCCAG AAACTTGCTC TACAGCATTG
    GCTTGAGGCG ATCGATCCTC GACATCGGTA TGGGCACAAT CTGCACTACT
    ACTACCACCG TTGGCTCCAT TGTGAGATCA ACCAGCCATT CTTCTACTGG
    TTGGATGTTG GTGAAGGGAA AGATGTCAAC TTGGAAGAGC ATTGCCCTAG
    ATGGAAGCTG CATAAGCAAT GCATCAAGTA CCTTGGCCCT AAAGAGAGGG
    AATCCTATGA AGTGATCGTC GAGGATTCGA GGCTGATATA CAAACTGAGC
    CGTCAGATCG TCAACACGAC CAAAAGCCGA AAGGGCTCAA AATGGATCTT
    TGTGCTGAGC ACATGCAAGA CTCTGTATAT TGGTCAGAAA CAGAAGGGCA
    CATTCCAGCA CTCCAGCTTC CTTGCAGGGG GAGCTACATC AGCTGCAGGG
    AGACTGATTG TAGAGGATGG AATTTTGAAG GCAGTCTGGC CTCACAGTGG
    GCATTACCGG CCAACAGAGC AGAACTTTCA GGAGTTCATG AATTTCCTGA
    AGGAGAGAAA TGTGGATCTG ACTGATGTTA TGTTGAACCC TTCGGAAGGT
    GAAGATGATG CCGAATTCAG CCTCAAGAGC AGCCATTCTA GGCAGGACTT
    GACCGAACTC TGTGAACCTG ACATGCAAGA ACATGAGGAA CAAGTCACAC
    AACACCATGG CGCTGACGAA ACCAAGACCA GCAGTGATGC ACCCACCATG
    ACATCCACCG AAACCATGGC GAGCACACCG GCAATCAGGA AATCCACCTC
    AGCCAACAAG CTGCAAGGGA AGCGGCCTCC GAGGCTGCTG ATCAGTTCCA
    ACAACACAGA ACTACCCGCA ACACATTGCA ACGGAAGGCC ATCACCGGTT
    CACAAGGACA TCGACGAGGA TTCCACCATG TTCGGAGAGT GCCTCGCCTT
    CTGCAAGAAG AACCTGTTTG CAGAGGAAGG CAATGAAGAA GATGAGCTGG
    TGGAAGTACC AGAGGAGATG ATCATGAACC GTATCAACTG CAAGAAGGCC
    ACGAAGTCAT ACCAGCTGGG GAAGCAACTG TCCTTCCAAT GGAGCACTGG
    AGCAGGTCCT CGGATCGGGT GCGTTCGCGA CTACCCATCG GAGCTCCAGT
    TCCGAGCATT GGAGGAGGTC AGCCTGTCAC CCCGGGGAAC TAGGTCGACG
    AGGTTTTCGT CGCCGAGGCG AAAGCCCTTG ACACCAAATA GCATTCCAGT
    TGCAAGATTT GGTTGTAGCC CTACAGCCCA AGGTGACAAC ATGGGGCTGA
    AGCCAAGGCA GAGGTGTGCT ACTTGGACTG CTTTCTAATG TTGATATGGC
    ATGCAAATTG CAAAGGCAAT GCTGCTTTTC TTCTCCTTAA CTGGAGGACG
    ATGCAAAGTG TATAGTGAGT GAGGGAAACA TGAGAATGTC ATTCTTTGGT
    TTTGTAGATG TGTAGAGCAA ACACACCATG GCTTCCAAGG AACAAGCAAT
    AAGATGTACC TTCCGAAGAA GTAATAACAA GTAATAAGAT GTATTTTTAG
    ATATGACACA TTTGACACTC GCAAGGTGCA AGCAAAAATA GAGATTACAG
    GTTTTCAGGG AGGAAAAGAA ACAGATGCCA GAATTTGTAC CACAAAAGAT
    GATCAAGCTA AGGAATTTGA TGTCTCCAAC C

    Gene models with high sequence identity

    1. AT3G13600.1 [+] show detail - calmodulin-binding family protein
      E-value: 2e-153; Score: 540.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G13600.1

    Model type
    Protein coding
    Short Description
    calmodulin-binding family protein
    Computational Description
    calmodulin-binding family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 2440 Blast hits to 1727 proteins in 273 species: Archae - 4; Bacteria - 163; Metazoa - 734; Fungi - 252; Plants - 308; Viruses - 55; Other Eukaryotes - 924 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR