K03243

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K03243

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • upturned (PATO:0002031)
    (Rosette leaf::Shape::hyponastic)
  • present in greater numbers in organism (PATO:0000470)
    (Rosette leaf::Number::many)
stem internode (PO:0020142)
  • increased length (PATO:0000573)
    (Stem::Shape::long internode)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K03243

Determination of introduced cDNA(s)

  • J023127G05 - Rice Full-length cDNAs - Original: J023127G05

    full reading [+] show sequence

    Nucleotide sequence: J023127G05 - full reading 
    GTCTGCTCCT GAATCTCCTC CTATTGCCCT TCTGTCTCAC ATCCCTGTCT 
    CATAATTAAA GTCATAATTA AGGAGCTTCT CTAAGGTGAT TGGGACTTGT 
    TGCAGGGATC AGGAGGAAAA CAACAAGGAT AACTTAAATT TTGGATTAAC 
    AACAAGAGGA AGTGGATCAA CCAGACAAGA GGAAAACGTG CAAACAAGAC 
    AGGCTTGCAA CATCACCTTG AGTCCAAAGC CAAGAAAGAT GGGGCTGTCA 
    ATCTCATACC CACCAGACGA CTACCTGCCA GCAATGGAGG ACAACATGGG 
    CAGGCTGTTC ATCCGGTCCC TCAGCTTCGA CGACGACATG GAGGCCGCCG 
    CCGATGACTC GCCGTCGACA TCACCGATGC CATCACCGTC GGCGACATTG 
    CTGCCGGCAT TCGGCTCCGG GGGGAAGCTG ATCATAGAGG GCTCCCTGAG 
    CTTCAAGAGA AGAGAGGCTG ACCCGGTTCA GATGGAGACC ATGATATCCA 
    TCAGGAGTCC CAAGTCTGAC AAGGAGAGCT GCAGCAGCAA GCCAAATGCT 
    ACTGCTGGTG CATCGAGATT TGCGCTTGCC GGAGACCAGA CACCGGAGGA 
    TTCTCCGGTG ATCGCCGGAG TTGCCAGCCC CAAGCACCAG GCAGCGGCTG 
    TCAGGCTGCA GAAGGTGTAC AAGAGCTTCA GGACAAGAAG GCAGCTCGCA 
    GATTGCGCCG TTCTTGTCGA GCAGAGCTGG TGGAAATTGC TCGATTTCGC 
    ACTGCTCAAG CGGAATTCGG TGTCGTTCTT CGACATTGAG AAGCCCGAAA 
    CGGCCATCTC GAGATGGTCT CGGGCAAGAA TGAGGGCTGC CAAGGTTGGC 
    AAAGGTCTGT CCAAAGATGA GAAGGCCCAG AAACTTGCTC TACAGCATTG 
    GCTTGAGGCG ATCGATCCTC GACATCGGTA TGGGCACAAT CTGCACTACT 
    ACTACCACCG TTGGCTCCAT TGTGAGATCA ACCAGCCATT CTTCTACTGG 
    TTGGATGTTG GTGAAGGGAA AGATGTCAAC TTGGAAGAGC ATTGCCCTAG 
    ATGGAAGCTG CATAAGCAAT GCATCAAGTA CCTTGGCCCT AAAGAGAGGG 
    AATCCTATGA AGTGATCGTC GAGGATTCGA GGCTGATATA CAAACTGAGC 
    CGTCAGATCG TCAACACGAC CAAAAGCCGA AAGGGCTCAA AATGGATCTT 
    TGTGCTGAGC ACATGCAAGA CTCTGTATAT TGGTCAGAAA CAGAAGGGCA 
    CATTCCAGCA CTCCAGCTTC CTTGCAGGGG GAGCTACATC AGCTGCAGGG 
    AGACTGATTG TAGAGGATGG AATTTTGAAG GCAGTCTGGC CTCACAGTGG 
    GCATTACCGG CCAACAGAGC AGAACTTTCA GGAGTTCATG AATTTCCTGA 
    AGGAGAGAAA TGTGGATCTG ACTGATGTTA TGTTGAACCC TTCGGAAGGT 
    GAAGATGATG CCGAATTCAG CCTCAAGAGC AGCCATTCTA GGCAGGACTT 
    GACCGAACTC TGTGAACCTG ACATGCAAGA ACATGAGGAA CAAGTCACAC 
    AACACCATGG CGCTGACGAA ACCAAGACCA GCAGTGATGC ACCCACCATG 
    ACATCCACCG AAACCATGGC GAGCACACCG GCAATCAGGA AATCCACCTC 
    AGCCAACAAG CTGCAAGGGA AGCGGCCTCC GAGGCTGCTG ATCAGTTCCA 
    ACAACACAGA ACTACCCGCA ACACATTGCA ACGGAAGGCC ATCACCGGTT 
    CACAAGGACA TCGACGAGGA TTCCACCATG TTCGGAGAGT GCCTCGCCTT 
    CTGCAAGAAG AACCTGTTTG CAGAGGAAGG CAATGAAGAA GATGAGCTGG 
    TGGAAGTACC AGAGGAGATG ATCATGAACC GTATCAACTG CAAGAAGGCC 
    ACGAAGTCAT ACCAGCTGGG GAAGCAACTG TCCTTCCAAT GGAGCACTGG 
    AGCAGGTCCT CGGATCGGGT GCGTTCGCGA CTACCCATCG GAGCTCCAGT 
    TCCGAGCATT GGAGGAGGTC AGCCTGTCAC CCCGGGGAAC TAGGTCGACG 
    AGGTTTTCGT CGCCGAGGCG AAAGCCCTTG ACACCAAATA GCATTCCAGT 
    TGCAAGATTT GGTTGTAGCC CTACAGCCCA AGGTGACAAC ATGGGGCTGA 
    AGCCAAGGCA GAGGTGTGCT ACTTGGACTG CTTTCTAATG TTGATATGGC 
    ATGCAAATTG CAAAGGCAAT GCTGCTTTTC TTCTCCTTAA CTGGAGGACG 
    ATGCAAAGTG TATAGTGAGT GAGGGAAACA TGAGAATGTC ATTCTTTGGT 
    TTTGTAGATG TGTAGAGCAA ACACACCATG GCTTCCAAGG AACAAGCAAT 
    AAGATGTACC TTCCGAAGAA GTAATAACAA GTAATAAGAT GTATTTTTAG 
    ATATGACACA TTTGACACTC GCAAGGTGCA AGCAAAAATA GAGATTACAG 
    GTTTTCAGGG AGGAAAAGAA ACAGATGCCA GAATTTGTAC CACAAAAGAT 
    GATCAAGCTA AGGAATTTGA TGTCTCCAAC C

    Gene models with high sequence identity

    1. AT3G13600.1 [+] show detail - calmodulin-binding family protein
      E-value: 2e-153; Score: 540.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G13600.1

    Model type
    Protein coding
    Short Description
    calmodulin-binding family protein
    Computational Description
    calmodulin-binding family protein; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: calmodulin-binding family protein (TAIR:AT3G58480.1); Has 2440 Blast hits to 1727 proteins in 273 species: Archae - 4; Bacteria - 163; Metazoa - 734; Fungi - 252; Plants - 308; Viruses - 55; Other Eukaryotes - 924 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR