K03436

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K03436

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K03436

Determination of introduced cDNA(s)

  • J013088M11 - Rice Full-length cDNAs - Original: J013088M11

    full reading [+] show sequence

    Nucleotide sequence: J013088M11 - full reading 
    GGCCGTCATC TGAGGAGACG GAGAGCACAT GCGGGCGTCC GCTGGGTCTT 
    GCGTTCCACC TCAAGACGGG GATCCTCTAC TTCGCCGACG CCTACAAGGG 
    CCTGATGCGG GTTGGGCCGC GGGGTGGCCA GGCCGACGTG CTCGCCACGG 
    AGGCCGACGG CGTGCCGTTC AATTACCTCA ACGGCGTCGA CGTCGACCAG 
    GACACCGGTG ACGTCTACTT CACCGACAGC AGCACCACCA TCACACGCCG 
    ATACCAAGAG AACATCATGA GGAACCGCGA CGCGACGGCT CGGCTGATGA 
    AGTACGACGC GAAGACGAAG CAGGTGACGG TGCTGAAGGA CCGGTTGCCG 
    TACGCCAACG GCGTGGCCGT CAGCCACGAC GGGAGGTACC TCGTGGTGGC 
    GCACACGGGG CCGGCACAGG TGTTCAGGTA TTGGCTCAAG GGGGCCAAGG 
    CCGGCCAGTA CGAGCTCTTC GCCGACCTGC CCGGGTACCC CGACAACGTC 
    CGGCGAGACG CCAAGGGGGG CTACTGGGTG GGGCTCAACC GGGAGAAGAT 
    TACGTTCAAC GTGCCGGCGG CGGCTTCTCC GGCCAAGCAC CTGGTCGGCG 
    TCCGGCTCAA CGGCGACGGC GTCGAGGTGG AGGAGCTGAC GGCTGCTAGT 
    AGGGCTGTGA CGCTGAGCGA GGTTGTGGAG AGGGACCGCA AGTTGTGGCT 
    CGGCTCCGTC GATCTCGACT ACGTCGGCCT ACTGCAGTAG AAGGAAGTTA 
    TCTGTTTAGT GGTGTTAGGA ATAATAAAGG CAGGCTAATT AGGTATTTAG 
    CAGTAGAATC AGGATTGGTA CAACTCTTTT TTGCTGGCAG CTATATTAAT 
    TAGACGTTTT AGTGG

    Gene models with high sequence identity

    1. AT3G57030.1 [+] show detail - Calcium-dependent phosphotriesterase superfamily protein
      E-value: 3e-50; Score: 195.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Strictosidine synthase, conserved region 7.1e-26
    HMMPanther STRICTOSIDINE SYNTHASE 1.6e-78
    HMMPanther Strictosidine synthase 1.6e-78
    Gene3D Six-bladed beta-propeller, TolB-like 1.5e-35
    superfamily Calcium-dependent phosphotriesterase 1.1e-39

    See the detailed result >

    AT3G57030.1

    Model type
    Protein coding
    Short Description
    Calcium-dependent phosphotriesterase superfamily protein
    Computational Description
    Calcium-dependent phosphotriesterase superfamily protein; FUNCTIONS IN: strictosidine synthase activity; INVOLVED IN: alkaloid biosynthetic process, biosynthetic process; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Strictosidine synthase, conserved region (InterPro:IPR018119), Strictosidine synthase (InterPro:IPR004141), Six-bladed beta-propeller, TolB-like (InterPro:IPR011042); BEST Arabidopsis thaliana protein match is: Calcium-dependent phosphotriesterase superfamily protein (TAIR:AT5G22020.1); Has 1145 Blast hits to 1130 proteins in 241 species: Archae - 1; Bacteria - 292; Metazoa - 224; Fungi - 14; Plants - 486; Viruses - 0; Other Eukaryotes - 128 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR