K03439

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K03439

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K03439

Determination of introduced cDNA(s)

J033119K06 - Rice Full-length cDNAs - Original: J033119K06

full reading [+] show sequence

GGGCGGCGGC GAGCCCTCTT CTTCCCGGCA ACCGCGGCGG CGGAGACGAG 
CGCGACGCGG CGATTCCCCC CAATTGCTCC TCCCGCTTCC GCTCCATCTG 
GACGGGCTCG TACTACCGAT GCGCCGTTGA TTTCTGCAGG GCGCAGCACT 
TGAGGTTGTT TAGATCGGCC TGCGGCGCGA GCTCGGGAGC TGTATACATG 
GAGAAAGCGA GGTTGAGAGC TTTCCAGAGG GAGCAAGCCA CGGCCAAGAC 
ATCTTTGCGA CGGATTTTCT CGAGATAAGG GCCAAAGAGC CGTCTGTTCA 
TGTTCTGGTT ATTCCCGGAA ATCCAGGTAT CGTTGCATTC TACAAGGACT 
TTGTTGAAGA GCTCTATGAG AACCTCGGTG GGCAAGCATC TATTACAGCG 
ATTGGGCATA TTTCACATAG CAAAAAGGAT GCAGAGCGTG GACGATTGTT 
TTCGTTGCAT GAACAAATTG ATCACAAGGT CGATTTCATT GAGCAAGAAT 
TTCAACATTC GGAACAATCA TTAGTTCTGG TTGGTCATTC AATTGGTGCC 
TACATATGCC TGGAAATCTT CAAAAGACTT CAGAAGAAGG TGAAACTTTG 
TGTAGGACTC TATCCATTTT TAACACTCAA CAAGAAGTCC ATGGAGCAAT 
CAGCTATTGG ATATATTGCA AGGTCATCTC TCCTAAGTAA AGGGGTTAGC 
TCATTTGTTT CTTTTATCGG ATCACTCCAA GCTTCAGTAA CTAGGGGCAT 
CATGAGAAGG TTACTTGGAC CTTCATGGTC TGTAACGGCT GTCGAAGCTA 
CATGCGGCCA TCTCTTATGG TACCATACGA TGCGTAATGT TCTCTTCATG 
GCAATGACAG AGTTCACGAA GCTCTCTGAA GAACCGGACT GGAATTTCAT 
CAGTGCAAAA CAGGACCAGA TTGCATTTCT GTTTGATGTG GACGATCACT 
GGGGTCCGCT TGCACACTTG GAAGAGATCT CAAAGCGTGC TCCTGGGGTT 
GCCTTGTCTG TCGAAACTGA AGGCCATACA CACGGCTATT GCTGCACGGA 
AGCTGGATCG TTTTGGGCTG CAGACTACGT GGCTAATTTG ATTAAAACTA 
AATTCTGATT GGAAATTCAA GATGAAAATT GTACCGTAGT CAGACTCAGT 
ATTTTTATCC TCCAAAGGGA GATAGTAAGA ATAATGAAAT AAACCGGTTG 
GATCAACCTC ATCAATC

Gene models with high sequence identity

AT3G11620.2 [+] show detail - alpha/beta-Hydrolases superfamily protein
E-value: 3e-96; Score: 348.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Protein of unknown function DUF2305	4.6e-57
superfamily	alpha/beta-Hydrolases	3.9e-14
Gene3D	no description	0.00088
HMMPanther	LIPASE	4.4e-48

See the detailed result >

AT3G11620.2

Model type: Protein coding
Short Description: alpha/beta-Hydrolases superfamily protein
Computational Description: alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2305 (InterPro:IPR019363); Has 334 Blast hits to 332 proteins in 157 species: Archae - 0; Bacteria - 7; Metazoa - 123; Fungi - 108; Plants - 47; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Link: InterPro Scan - TAIR