K03507

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K03507

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K03507

Determination of introduced cDNA(s)

  • J023038B22 - Rice Full-length cDNAs - Original: J023038B22

    full reading [+] show sequence

    Nucleotide sequence: J023038B22 - full reading
    GATTGCCATC TATCACCTCA CCTGAGCTGA AATCAAGAAC TGGATCTAGG 
    AGAAGGTCAT GGTTCCAAGG ATACTCATCG TTCTCCTGGT TGTGCTGCTT
    GGATTGGCAT TCCAGGCAAT TCTCCGGCCA CCACCTCAAA AATTGTGTGG
    CTCACCCGGT GGACCTCCTG TGACATCTCC AAGAATCAAG CTCAGAGATG
    GAAGATATCT TGCTTACAGA GAAGATGGAG TTCAGAAAGA CAAGGCCAAG
    TTCAAGATCA TCAGTGTCCA TGCGTTTGAT TCCACCAAGG ACTTCCCCTT
    GCAGGTTTCT AAGGAACTGG TGCATGAACT GGGAATCTAC ATTGTTGGTT
    TCGACAGAGC AGGGTATGGG GAAAGTGATC CGAATCCTAA GAGGGATGTG
    AAGAGTGAGG CTTTGGATAT TGAGGAGCTT GCTGACCAGC TCGAGCTTGG
    ACACAAGTTC TATGTGTTGG GAGTGTCCAT GGGAGGATAC TCAATTTGGG
    GATGCCTTCA GTACATACCA AACAGGCTTG CAGGAGCTGC CATGGTTGTG
    CCAATTATCA ACTACTGGTG GCCTTCATTC CCAGCTGAGC TATCCAGGCA
    AGCCTTCAAG AGGCTCATCG TGCCAGAGCA GAGGACACTC TGGATTGCAC
    ACAACATGCC ATCTTTGCTC TACCAGTGGA TGACCCAAAA GTGGCTCCCT
    TCTTCTGCGG CAGCCATGCG CCACCCTGAA ATATTCAGCA AGCATGATTT
    GGAGGTTCTT CAGAAGATGA TGGCAATGCC TCTCATTGAG AATAAATCTA
    GGCAGCAAGG CATTTATGAA TCAACACATC GTGATTTGCT TGTTGCTTTT
    GGAAAGTGGG AGTTTGATCC AATGAATATT ACCAATCCAT TTCCTCAAAA
    TGAGGGTTCT GTACACATCT GGCAAGGTTA TGAAGACAGG TTGGTGCTGG
    TTGAGCTGCA ACGGTACATT GCCCAGAGGC TTCCTTGGAT CCAGTATCAT
    GAATTCCCTG AAGGAGGACA CATGTTCATG CTGGTAGATG GATGGACTGA
    CAAAATCATC AGAGCGCTCT TGGTTGGAGA ACAGCTCTGA AGTCTCATCA
    AATCATTCTG TGCTTGTTAG CTTATCATCG ATAGCCAAAA GTTAAAATTT
    CAAACTTATT AATTCTAGAG TTGATTTTAC ATTTTCT

    Gene models with high sequence identity

    1. AT3G48410.1 [+] show detail - alpha/beta-Hydrolases superfamily protein
      E-value: 3e-103; Score: 372.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 3.3e-23
    superfamily alpha/beta-Hydrolases 3.3e-34
    HMMPfam Alpha/beta hydrolase fold-1 0.00000000021

    See the detailed result >

    AT3G48410.1

    Model type
    Protein coding
    Short Description
    alpha/beta-Hydrolases superfamily protein
    Computational Description
    alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G36290.1); Has 1039 Blast hits to 1035 proteins in 267 species: Archae - 10; Bacteria - 561; Metazoa - 10; Fungi - 51; Plants - 319; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR