K03746

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K03746

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K03746

Determination of introduced cDNA(s)

  • J013044J15 - Rice Full-length cDNAs - Original: J013044J15

    full reading [+] show sequence

    Nucleotide sequence: J013044J15 - full reading 
    GACATTGCTG AACCCCACCA CGAACAGCTC AAGTACACAG TCACGAGAAC 
    TCGTGGAAAA ACCGGGCTAA ATCCAACGCC TCTCCTGAGT AGAAAACCGC 
    TACCGCTCGG CATCTTCCTT CTTGTTTGAT TCGTGAGCAG TTGGGTTCAG 
    CCTTCCGGGC TCAGTTCAGT CTGATGTGAA TGGAAGTTTC ATCACTATTC 
    CAAGGTTGCT ATTTTGATTA ACTATAGCTT GTGGCAGTAT TTGGCCATCT 
    TGCCTGATAA ATAACCAGTC ATGGCGACAA CGGCTTCAAA GATAATTCCT 
    CAAACCCTCC CAGAAATCCC AACCACCCCA GAACCACAGC AGTATACTAA 
    GACTGCTCCA GACATCCCCA AATCAAACAA TTCTCGTTCT TCAGTACCTA 
    AATTGCTACA AGAATCAGAC CGCGGCAAGT TGAATCATAA ATTGGAGCCA 
    AAGGAACAAA AGCCAAACCA CCACCTGAAA GAGTCTGTTG ATGTTTCATC 
    GGCCAAGTGT CCGACAGAAG TGAGCGAAGA AATGGTTTCA GAAGGTATTG 
    CAAGTCAAGA AAAGAAGGTT GTGGAGTATG AGAGTGTGAA TGGGAGCTCC 
    ACCTCATTTC ACACATGCGA AGGGAGTGGT CCAGGAAAAG CAAGTGGAAG 
    TGCTAGGATG ACGGATCGAT CCGAGACCGG TGAAAGGGGT AGTAGTAGCA 
    GATGCAGGCC AAGCACAAGC AGTGATATCA GTGATGAGAG TTCGTGTAGC 
    AGCATGAGCA GCACCACGAA GCCTCATAAG TCAAATGATT CACGGTGGGA 
    GGCGATCCAG ACGATCAGGG TGAGAGATGG GATCATTGGG TTGAGCCATT 
    TCAGGCTGTT GAAGAAGCTA GGCTGTGGTG ATATTGGCAG TGTATATCTC 
    TCTGAATTGA GCGGGGCGAA AAGCTATTTC GCGATGAAGA TTATGGATAA 
    GGCTTCATTA GCAAGCCGCA AGAAGTTGCT TCGAGCTCAA ACTGAGAAAG 
    AAATTCTGCA ATGCCTGGAT CACCCCTTTC TTCCTACATT GTACACTCAC 
    TTCGAGACTG ACAAGTTCTC ATGCCTGGTG ATGGAGTTCT GCCCAGGAGG 
    AGACCTGCAT ACCCTTAGGC AGAGGCAGCC GGGCAAATAT TTTCCAGAGC 
    AAGCTGTCAA ATTCTATGTA GCAGAAATCC TCTTGGCATT AGAGTACCTG 
    CACATGCTCG GCATCATATA CCGTGATCTC AAGCCAGAAA ACGTCCTCGT 
    TCGGGAGGAT GGGCACATCA TGCTATCTGA CTTTGACCTC TCACTCCGTT 
    GCGCGGTGAG TCCAACACTA ATAAAATCAT CCAACCCGGA CGCTGAAGCA 
    CTCAGGAAGA ACAGCCAAGG TTACTGTGTC CAGCCAGCAT GCGTCGAGCC 
    ATCCTGCGTG ATTCAGCCAT CATGTGCAGC CCCTACAACC TGCTTTGGCC 
    CTCGATTCTT CTCCAAATCC AAGAAAGATC GCAAACCGAA GCCTGAAATT 
    GCGACCCAGA TCAGCCCTTG GCCGGAGCTC ATAGCGGAGC CCAGCGATGC 
    TCGTTCAATG TCATTTGTTG GAACACATGA GTACTTGGCC CCAGAGATCA 
    TCAAAGGCGA GGGCCATGGT AGCGCTGTCG ATTGGTGGAC CTTCGGGATA 
    TTCTTGTATG AACTTCTGTT TGGAAAGACA CCATTCAAGG GCTCTGGCAA 
    CAGGGCAACA CTGTTCAATG TCATTGGTCA GCCATTGCGC TTCCCGGAGT 
    ACCCAATTGT CAGCTTCTCA GCAAGAGATT TGATAAGAGG TCTACTTGTG 
    AAGGAGCCCC AGCATCGGTT AGCTTACAAA CGCGGCGCCA CAGAGATAAA 
    GCAGCATCCG TTCTTCGAAG GCGTAAACTG GGCGTTGATC CGATGTGCAA 
    GCCCACCGGA GGTACCAAAG CCTGTCGAGA TTGAGAGGCC ACCAAAGTTG 
    CCCCCATCCA CATCTGGAAC TACTGATGTG TCCAGTGGTG CGCCTCAGAA 
    GGGTTCTGAT GGCTACTTAG AGTTTGATTT TTTCTGATGA ACATATGGAT 
    TTCGATATAT ATCGATTGTG CGATGAGATG TAGTTTTCTT TAGGTGTAGT 
    GTTTCTGGCA GATGATAAGT GTTGTAGACT GTCCACTGCA ACCTGTTTCT 
    GTTATTTCCT GCATAATCTA TATTCTTTTG C

    Gene models with high sequence identity

    1. AT5G47750.1 [+] show detail - D6 protein kinase like 2
      E-value: 0; Score: 716.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Protein kinase-like domain 1.2e-83
    HMMPfam Serine/threonine-protein kinase-like domain 1.6e-35
    HMMPfam Serine/threonine-protein kinase-like domain 3.7e-20
    ProfileScan Protein kinase, catalytic domain 44.117
    Gene3D no description 6.6e-59
    HMMSmart Serine/threonine-protein kinase domain 9.4e-87
    HMMSmart Tyrosine-protein kinase, catalytic domain 5.4e-06
    PatternScan Serine/threonine-protein kinase, active site 0
    HMMPanther NONPHOTOTROPIC HYPOCOTYL PROTEIN 1(PHOTOTROPI 1.3e-243
    HMMPanther SERINE/THREONINE PROTEIN KINASE 1.3e-243

    See the detailed result >

    AT5G47750.1

    Model type
    Protein coding
    Short Description
    D6 protein kinase like 2
    Computational Description
    D6 protein kinase like 2 (D6PKL2); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleolus, nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 1 (TAIR:AT4G26610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR