K03746

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K03746

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K03746

Determination of introduced cDNA(s)

  • J013044J15 - Rice Full-length cDNAs - Original: J013044J15

    full reading [+] show sequence

    Nucleotide sequence: J013044J15 - full reading
    GACATTGCTG AACCCCACCA CGAACAGCTC AAGTACACAG TCACGAGAAC 
    TCGTGGAAAA ACCGGGCTAA ATCCAACGCC TCTCCTGAGT AGAAAACCGC
    TACCGCTCGG CATCTTCCTT CTTGTTTGAT TCGTGAGCAG TTGGGTTCAG
    CCTTCCGGGC TCAGTTCAGT CTGATGTGAA TGGAAGTTTC ATCACTATTC
    CAAGGTTGCT ATTTTGATTA ACTATAGCTT GTGGCAGTAT TTGGCCATCT
    TGCCTGATAA ATAACCAGTC ATGGCGACAA CGGCTTCAAA GATAATTCCT
    CAAACCCTCC CAGAAATCCC AACCACCCCA GAACCACAGC AGTATACTAA
    GACTGCTCCA GACATCCCCA AATCAAACAA TTCTCGTTCT TCAGTACCTA
    AATTGCTACA AGAATCAGAC CGCGGCAAGT TGAATCATAA ATTGGAGCCA
    AAGGAACAAA AGCCAAACCA CCACCTGAAA GAGTCTGTTG ATGTTTCATC
    GGCCAAGTGT CCGACAGAAG TGAGCGAAGA AATGGTTTCA GAAGGTATTG
    CAAGTCAAGA AAAGAAGGTT GTGGAGTATG AGAGTGTGAA TGGGAGCTCC
    ACCTCATTTC ACACATGCGA AGGGAGTGGT CCAGGAAAAG CAAGTGGAAG
    TGCTAGGATG ACGGATCGAT CCGAGACCGG TGAAAGGGGT AGTAGTAGCA
    GATGCAGGCC AAGCACAAGC AGTGATATCA GTGATGAGAG TTCGTGTAGC
    AGCATGAGCA GCACCACGAA GCCTCATAAG TCAAATGATT CACGGTGGGA
    GGCGATCCAG ACGATCAGGG TGAGAGATGG GATCATTGGG TTGAGCCATT
    TCAGGCTGTT GAAGAAGCTA GGCTGTGGTG ATATTGGCAG TGTATATCTC
    TCTGAATTGA GCGGGGCGAA AAGCTATTTC GCGATGAAGA TTATGGATAA
    GGCTTCATTA GCAAGCCGCA AGAAGTTGCT TCGAGCTCAA ACTGAGAAAG
    AAATTCTGCA ATGCCTGGAT CACCCCTTTC TTCCTACATT GTACACTCAC
    TTCGAGACTG ACAAGTTCTC ATGCCTGGTG ATGGAGTTCT GCCCAGGAGG
    AGACCTGCAT ACCCTTAGGC AGAGGCAGCC GGGCAAATAT TTTCCAGAGC
    AAGCTGTCAA ATTCTATGTA GCAGAAATCC TCTTGGCATT AGAGTACCTG
    CACATGCTCG GCATCATATA CCGTGATCTC AAGCCAGAAA ACGTCCTCGT
    TCGGGAGGAT GGGCACATCA TGCTATCTGA CTTTGACCTC TCACTCCGTT
    GCGCGGTGAG TCCAACACTA ATAAAATCAT CCAACCCGGA CGCTGAAGCA
    CTCAGGAAGA ACAGCCAAGG TTACTGTGTC CAGCCAGCAT GCGTCGAGCC
    ATCCTGCGTG ATTCAGCCAT CATGTGCAGC CCCTACAACC TGCTTTGGCC
    CTCGATTCTT CTCCAAATCC AAGAAAGATC GCAAACCGAA GCCTGAAATT
    GCGACCCAGA TCAGCCCTTG GCCGGAGCTC ATAGCGGAGC CCAGCGATGC
    TCGTTCAATG TCATTTGTTG GAACACATGA GTACTTGGCC CCAGAGATCA
    TCAAAGGCGA GGGCCATGGT AGCGCTGTCG ATTGGTGGAC CTTCGGGATA
    TTCTTGTATG AACTTCTGTT TGGAAAGACA CCATTCAAGG GCTCTGGCAA
    CAGGGCAACA CTGTTCAATG TCATTGGTCA GCCATTGCGC TTCCCGGAGT
    ACCCAATTGT CAGCTTCTCA GCAAGAGATT TGATAAGAGG TCTACTTGTG
    AAGGAGCCCC AGCATCGGTT AGCTTACAAA CGCGGCGCCA CAGAGATAAA
    GCAGCATCCG TTCTTCGAAG GCGTAAACTG GGCGTTGATC CGATGTGCAA
    GCCCACCGGA GGTACCAAAG CCTGTCGAGA TTGAGAGGCC ACCAAAGTTG
    CCCCCATCCA CATCTGGAAC TACTGATGTG TCCAGTGGTG CGCCTCAGAA
    GGGTTCTGAT GGCTACTTAG AGTTTGATTT TTTCTGATGA ACATATGGAT
    TTCGATATAT ATCGATTGTG CGATGAGATG TAGTTTTCTT TAGGTGTAGT
    GTTTCTGGCA GATGATAAGT GTTGTAGACT GTCCACTGCA ACCTGTTTCT
    GTTATTTCCT GCATAATCTA TATTCTTTTG C

    Gene models with high sequence identity

    1. AT5G47750.1 [+] show detail - D6 protein kinase like 2
      E-value: 0; Score: 716.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Protein kinase-like domain 1.2e-83
    HMMPfam Serine/threonine-protein kinase-like domain 1.6e-35
    HMMPfam Serine/threonine-protein kinase-like domain 3.7e-20
    ProfileScan Protein kinase, catalytic domain 44.117
    Gene3D no description 6.6e-59
    HMMSmart Serine/threonine-protein kinase domain 9.4e-87
    HMMSmart Tyrosine-protein kinase, catalytic domain 0.0000054
    PatternScan Serine/threonine-protein kinase, active site 0
    HMMPanther NONPHOTOTROPIC HYPOCOTYL PROTEIN 1(PHOTOTROPI 1.3e-243
    HMMPanther SERINE/THREONINE PROTEIN KINASE 1.3e-243

    See the detailed result >

    AT5G47750.1

    Model type
    Protein coding
    Short Description
    D6 protein kinase like 2
    Computational Description
    D6 protein kinase like 2 (D6PKL2); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: nucleolus, nucleus, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 1 (TAIR:AT4G26610.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR