K03839

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K03839

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • increased length (PATO:0000573)
    (Rosette leaf::Shape::long)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • epinastic (PATO:0000945)
    (Rosette leaf::Shape::epinastic)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K03839

Determination of introduced cDNA(s)

  • J013151M13 - Rice Full-length cDNAs - Original: J013151M13

    full reading [+] show sequence

    Nucleotide sequence: J013151M13 - full reading 
    GGGGCCCATC TCCTTCCACA CCGGGACGCC GGCCGCCGCC GCTGCCGCCG 
    CCCCGCGCGC CATGGAGCCG GACGCCGCCG ACGACGACTA CATGGGGGAC 
    CTGTCCCACT TCCTCCCGCC GCCGACCCCT TCCTCCCCGT CGAGGAGCCT 
    CGGGCGGAGG AGGCAACCGC CGGCGCAGCA GGCGCAGGGG CAAGGGAAGC 
    GCGCGAAGGG GGTGGTGCCA TGGCAGGAGC GGCGGCGGCG GGATCGGGAG 
    CGGAAGCAGC GGGAGGAGGA CGAGCGGACG ATGGCCGGGC TCGCGGAGGC 
    CATACCGGAG ACCAACGTGG GTTTCAGGCT GCTGAAGCGG ATGGGGTACG 
    ACCCCGCGGC CGGTGGCGGC GCGGGCGCCG AGCCGGTGGG AATCGAGATC 
    CGCCGCTCCC GTGCGGGGCT TGGGGCGGAG CCTGCTGTAT CGGTGGCGCC 
    GCCGCAGCCG TCGGCGGAGG TGGCGGAGGG GGAGAGGAGG CGGGTGGAGG 
    AGATGGCGGT GGAGTTGAGG GCGAGGCAAA GCACGCAGTG GAGGAACCGG 
    AGGGTGGTGT GGGATTACCG GAAGGCTGAA GCCGCGCTCG CGCAGCTGGA 
    GAATCGGGAG GCTGCGCCGC CACCGCCGGA GGGGGAGGAG AAGGCTGAAG 
    AGGAGGAAGA GGAGGTGATC ACTGAAGAGG ATTTGCAAAA TATATTGGCT 
    AAGCTGCGCG ATGAACACTA CTATTGCCTT TATTGCGGTT GCAAGTATGA 
    ATCAGCAGAA GCATTGGCAA ATGAATGTCC TGGGCCAAAT GAAGATGACC 
    ATTAATTCGC TGTGTCTGGG GCAACAAAGA ATGGTCCTTG TTACAACAGG 
    ATTTGCAAGT TGCTGTAAAC GATATTTTGG GACCTATACT GCGAATCACC 
    TTTCACATTT CAGTATCACA TCTCAATGTT AGAAATGATA ATTCTCTTGC 
    GGCAGCTTAA AGCTACAAGG GTGGAACTGG AAAGCTTCAG GAAGAGTTTA 
    CAGTTCTGCA TATGGTATGC TCTGCTCCTC CATGTAGAAG GCTTCAAAGG 
    AGCCCTTGCT ACAGCTCTTG AAAAGTCCAA ATCAAGGTGC CTCTCCTCAC 
    AGTGAAAAAG AGTCGTGTCA ATGGAACAAG TGATCTGCGA CATATGATAA 
    TGATAAGCAG ATGGCGCCAA AGCAATTATA CATTTCTGTT TTCCAATCAC 
    GGTGATAACT GTTCAAGTTG GTAGTACTGT GTTTAGGATG GCACTGATAT 
    TTTTGATTCA TTCTAGCAAT ACATCATACA CCTGTTGCTG GGATCTATCT 
    TCAATGCAAT GATGGTTTTA CAACTGTGTC AAATCTTGCA TGTGACATTA 
    AGATCCATAA TCACTGTTTG CTGATC

    Gene models with high sequence identity

    1. AT3G57910.1 [+] show detail - D111/G-patch domain-containing protein
      E-value: 8e-22; Score: 102.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther UNCHARACTERIZED 0.000000001
    HMMPfam D111/G-patch 0.00022
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT3G57910.1

    Model type
    Protein coding
    Short Description
    D111/G-patch domain-containing protein
    Computational Description
    D111/G-patch domain-containing protein; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: D111/G-patch (InterPro:IPR000467); BEST Arabidopsis thaliana protein match is: D111/G-patch domain-containing protein (TAIR:AT5G26610.3); Has 4544 Blast hits to 3364 proteins in 343 species: Archae - 10; Bacteria - 136; Metazoa - 2001; Fungi - 471; Plants - 301; Viruses - 43; Other Eukaryotes - 1582 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR