K04541

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K04541

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K04541

Determination of introduced cDNA(s)

  • J023108B05 - Rice Full-length cDNAs - Original: J023108B05

    full reading [+] show sequence

    Nucleotide sequence: J023108B05 - full reading
    GAGCCTTCCG CTGCTGCTGG ACGAGTGGAT GACGAGCACT AGGCCCATCT 
    TGTTGTTTAT CCTTTTTCTG AACCTCACAA TGAGCGATGC TACTGAAATT
    CAGCTGCAGA TTACAGGTGT CCGAGGCCAA GAAGACGTGG TAGCAGAGTC
    TGACAAGAGC ACGTCTCGAG CAGATGGAAC TGCGGCGGCG GCGGCGGCGG
    CGGCGCCGCT GCCGCCTGTG TCCAGCCAGC GGCTGCGGTG GTGGGCGGTG
    GTCCTTGCCA ACATCGTGTT CGTCCTCGGC GGGCAGAGCG TGGCCACGCT
    CCTCGGCCGG ATTTACTACG ACCAGGGCGG CGGCAGCTTG TGGCTGGCGA
    CGGTGGTGCA GTCCTGCGGC GCGCCGCTCG CCGTCCCACT GCTGCTCTAC
    TTCCGGCGGC CAGAGGCCTC CCCGGTGGCA CGTCCGCCGC TGCTCAAGAT
    CGCTGCCATC TACGCCGGCC TTGGCGTCCT CCTCGCCGGC GACAACCTGA
    TGTACTCCTA CGCGCTCCTC TACCTGCCGC TGTCGACGTA CTCCCTCGTC
    TGCGCCACCC AGCTCTGCTT CAACGCCGTC TTCTCCTACT TCCTCAACAA
    GGAGAGGTTC ACCGCGCTCG TGCTCAACTC CGTCGTGCTG CTCACCTTCT
    CCGCCGCGCT CGTCGGCGTG AGCCACTCCT CGGAGGAGAC CAACAGCAGC
    GTCCCGGAGG GCAAGTTCGC GCTGGGGTTC GTCCTGGCGC TGTCGGCGTC
    GGCGGCGTTC GCCCTGATCC TGTCCCTGAT GCAGCTCACG TTCGACACGG
    TGCTCAGGAG CAACGCGGCA CACGCCGTGC TGGAGCTGCA GCTCTGGAGC
    AACGCCGCCG CGTCGTGCGT GTCGGTGGCC GGGCTGTTCA TCTCCGGCGA
    GTGGAGCTCC CTGACGGCGG AGATGGACGG GTACAAGAAG GGCGAGGTGG
    CCTACGGGAT GACGCTGGCG TGGACGGCCA TCTCGTGGCA GCTCGCCACG
    ATGGGCATGG TGGGGCTCGT CGCGACGGTG TCGTCGCTGT TCACGAACGT
    GATCAGCACG GTGGGGATGC CGCTGTCGCC GATCATGGCG GTGATCTTCC
    TCGGCGACCG GATGGACGGT GCCAAAGTGA TAGCCATGCT CATTGGCATC
    TGGGGATTCT TGTCCTACGT TTACCAGCAC TACCTCGATG ACGCCAAGAG
    CAAGAACACA GCTGGGTCAG CTGACGTCAC ACAAACTTCA GAAGCAAAAC
    TCTGAAGCCT GATACGCCTG ATAGTGATAC CCAGAGTGAA TTTTACTGTA
    CTTGATCTCT TTTTTTTCAC GGAATCAATT GGAAATTTGG AATACTGGTC
    TTATCTTCCC T

    Gene models with high sequence identity

    1. AT1G44750.1 [+] show detail - purine permease 11
      E-value: 4e-88; Score: 322.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Multidrug resistance efflux transporter EmrE 0.00000011
    superfamily Multidrug resistance efflux transporter EmrE 0.00014
    Coil coiled-coil 0
    HMMPfam Protein of unknown function DUF250 1e-28

    See the detailed result >

    AT1G44750.1

    Model type
    Protein coding
    Short Description
    purine permease 11
    Curator Summary
    Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.
    Computational Description
    purine permease 11 (PUP11); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Drug/metabolite transporter superfamily protein (TAIR:AT4G08700.1); Has 428 Blast hits to 419 proteins in 52 species: Archae - 0; Bacteria - 15; Metazoa - 14; Fungi - 21; Plants - 366; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR