K04803

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K04803

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K04803

Determination of introduced cDNA(s)

  • J023023P13 - Rice Full-length cDNAs - Original: J023023P13

    full reading [+] show sequence

    Nucleotide sequence: J023023P13 - full reading 
    GTGGCGGCGG CCATACCGCA ACAAGTTCTC CTCCGCCGTC GCTTCCACGG 
    CCTCCCCCCA TCCCAAACGC GGTCGATCGC CGGCGAATCC CCACCGGACG 
    CCGAGGCGAC TGCCCCGCCG CTCGCCACCC TCCATCCCCG GCGTCCCCGA 
    AGTAACCCAC CGCCTCCTTC TTCTTCCCTC CATCTCTCCT GCACCCGAGT 
    GAGGGCGACC GCGATCTCTC AGATCCACCG AATCCGGAGA CCCCGCTCGC 
    GATCGAGTCA AACGCCTCCG AACCCTTAAT CCTCGCCGCC GCCGCCGCCG 
    CCGACGACGA CGACGAGGAC CTCCCCACTA GGATGAGCGG GAGGAAGAAT 
    GCCGGCAAGG CCTCGCCGTT TCTGCTCCTC CTCATCTCGG TGGGCTGCTT 
    CTTCGCGACC TACAACTTCC TGACGATGGT GGGCCACGGC CGGAGCCGGG 
    ACGCCGGGCC GCGGAAGATT CTCGGCGGCG TCGGCGGCGT CGGCGGCGGC 
    GGCTCGGACC CGTCGAAGAG GTTCCACGTC GCGCTCACGG CGACGGACGC 
    GCTCTACAGC CAGTGGCAGT CGCGGGTGAT GTACTACTGG TACAGGGAGA 
    TGAGGGATCG GCCTGGCTCC GACATGGGCG GCTTCACGCG GATCCTGCAC 
    TCCGGGAAGC CCGACGGATT GATGGATGAG ATACCTACCT TGGTGGTTGA 
    TCCCCTCCCC GAAGGCGCGG ATCGAGGTTA CATTGTCCTA AACAGGCCTT 
    GGGCATTTGT TCAATGGCTG AAGAAATCAA ACATCAAAGA AGACTATGTA 
    CTTATGGCTG AGCCAGATCA CATCTTTGTG AGGCCATTGC CAAACTTAGC 
    TCATGGCGAC GAACCTGCTG CGTTTCCCTT CTTCTACATC AAACCAACTG 
    AAAATGAAAT AATACTGAGG AAGTTCTTTC CTGAAGAAAA TGGACCAGTC 
    TCAAAAATTG ATCCTATTGG TAATTCCCCA GTGATTATCA AGAAGGCCCA 
    GCTTGAGAAG ATTGCTCCAA CTTGGATGAA TATTTCGTTG AAAATGAAAG 
    AGGATGTGGA GACAGACAAA GCTTTTGGAT GGGTCTTGGA AATGTATGCA 
    TATGCTGTCG CTAGTGCATT GCATGGTGTG CACTACAGCC TTCGTAAGGA 
    TTTTATGATT CAGCCTCCTT GGGACGCGAA ATCGGACAAC ACATTCATCA 
    TCCATTACAC TTATGGGTGT GATTATACAT TAAAGGGTGA GCTAACTTAT 
    GGGAAAATAG GGGAATGGCG GTTTGACAAA AGATCTTATC TTCGTTCACC 
    ACCGCCAAGA AATCTTACAT TACCTCCTCC AGGAGTTCCC GAAAGTGTGG 
    CCACCCTTGT GAAAATGGTC AATGAAGCCA CTGCAAACAT TCCAGGGTGG 
    GACGAAGAAA GGTGATTAAA TGGTTTTGCC TCGCTGATAC TCAATTCAGC 
    TGATAGTGTT TACATTAGAA GCCATCGAAG GATCTCCGTG GTCAATAAAA 
    CAAGTGAATC AACGCATGTT CTTCTTAGGC GGCAGACACG ATTGGCTAAT 
    TCCTACAAAT TAACCTAGAA TTAGTTTTTG GCAAGTAAAA CACGGTAGTT 
    ATTTGGTCAA GTGAGGTGGT CCATTTTTGG TGTTGTAAAG CTGAAACGTG 
    AGCTTTTGGT AATACTCCTA GATCATTCGA TTGTATTGTA AAGCAGAAAT 
    ATTAGTCAAG TTTGTTGCAC GGGAATGTTA CTCGATAATT GAGGCTTGGG 
    ATCCTTCGCG CTTGTGCCAT TACATGAAAT CTTTCAAAAA GTAGTGTTTG 
    TCATGAGAGG ATTGAGAGAG ATGGTTTGAG AGGGAAGCAT GGAATTCACA 
    TGACGATCAG GTGTTCCTAG TTAAGTTGCA TACTTACAGT CC

    Gene models with high sequence identity

    1. AT5G13500.3 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 2e-136; Score: 483.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G13500.3

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25265.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR