K04908

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K04908

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Adult plant::Plant height::short)
cauline leaf (PO:0000013)
  • abnormal (PATO:0000460)
    (Cauline leaf::Others)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K04908

Determination of introduced cDNA(s)

  • J033149N11 - Rice Full-length cDNAs - Original: J033149N11

    full reading [+] show sequence

    Nucleotide sequence: J033149N11 - full reading
    GGCGGCGACA CTGACAGTCT CCTCTTCCAC CACTGGCCTA GGGCAAGAGA 
    TCGACGAGAG GAGCGGAGGG AGGAGGAGGA GATGGGCGGA GTGGAGCAGG
    AGCAGCTGCT CAGCCTGGGC GTCCTCATCG ACATCGTCGA CGAGCAGTGG
    ATGCGCGACA CCCTCCCAGC CGACGATGTC CCCGTGCCGC CCGCCATGGC
    CGTGAAGACG GAGGAGGCGG AGGATCCAGC ACCCGCCAAT CAGGAAAGCC
    AACCAGCACA AGGGGATGTG TGGCGTGATT TCACATTGGA GAATCTCTGA
    TCACTTGTGA CCTACAAGTG CTTCCAGAGA TGAATATACC ATGCTGGGAA
    TCTAGGAGCT ACGTGGTCAT TGCAATTTCT GAGCTTCATA TAACTATAAG
    GTCATCTGAA CTTAGCGTAC TATCTGGTTT TGTTTCAGCT GTAGTTCGTC
    GAACCCATGC TTTAAACCGA TGTAAATGCT CCAGATATTG GTAGCACATT
    GCTGCATGAT GACACCGAAC CTTGTGATGA GAAATTATAT GTTGTGAACT
    ATGATGGTGA TGAGAACAGT CATTCAGATC TGGAACATAT CAAATCACTG
    GTAGTTTGCA GTC

    Gene models with high sequence identity

    1. AT1G73177.1 [+] show detail - bonsai
      E-value: 3e-10; Score: 62.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G73177.1

    Model type
    Protein coding
    Short Description
    bonsai
    Curator Summary
    The BONSAI gene encodes a protein with similarity to the APC13 component of the Anaphase Promoting Complex. Plants with lowered level of BONSAI expression, resulting from hypomethylation, RNAi knock-down, or a T-DNA insertion show some abnormalities in shoot and inflorescence development.
    Computational Description
    BONSAI (BNS); Has 44 Blast hits to 44 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR