K04947

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K04947

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K04947

Determination of introduced cDNA(s)

J023100J15 - Rice Full-length cDNAs - Original: J023100J15

full reading [+] show sequence

GAAGTGACCA ACCAGTGACC ACACCGCAAC TGAGATCTCT CTTCCAAAGG 
ACGATGAAAG TGAGAGCTCC TGAGTCCTGA GCTAATGGAG TCCAAGCCCA 
GCCGCAACGT CGTGCTATAC GCCGCCATGG GCGCGGGTCA CCTGCTCCCC 
ATGGTCGAGC TCGCCAAGCT CTTCCTCACC CGCGGCCTCG ACGTCACCAT 
CGCCGTCCCG GCCACCCCCG GATCGGGCAC CACGGGATCC CCCACCATCG 
CCGGCATCGC CGCCTCCAAC CCCTCCATCA CCTTCCACCA CCTCCCGCCG 
CCGCCGTCCT GCGCCGACCC CGATCCGAAC CCCCTCTTGC TCATGCTCGA 
CGTGCTCCGC CGGTCGGTGC ACTCCCTCGC GTCGCTCCTC CGATCGATCC 
CCTCCGTCGC GGCGCTTGTC CTCGACATAT TCTGCGCCGA GGCAGTCGAC 
GCCGCGGCGG CGCTCCACGT CCCCGCCTAC ATATACTTCA CCTCGGCCGC 
GGGCGCCTTT GCCGCCTCCC TAGGCCTGAT GCACCACTAC TCCACGACTA 
CCACCAACCT CAGAGACATG GGCAAGGCGC TCCTCCGTTT CCCCGGCGTC 
CCGCCGATAC CGGCATCGGA CATGCCGTCC CTCGTGCAGG ACAGAGAGGG 
TCGGTTTTAC AAGGCGCGGG TCAAGCTGTA CGCGCGCGCC ATGGAGGCGA 
GCGGCGTGCT GCTCAACACG TACGAGTGGC TTGAAGCGAG GGCCATGGGT 
GCGCTCCGGG AGGGAGCTTG CTCCCCGGAC CGCCCCACCC CGCCGGTGTA 
CTGCGTCGGT CCGCTGGTGG CGTCAGGCGA GGAGGAGGGA GGAGGGGTGC 
GGCACGCGTG CCTCGCGTGG CTGGACGCGC AGCCGGCGCG GAGCGTGGTG 
TTCCTCTGCT TCGGCAGCAT GGGCTCCTTC TCGGCGGCGC AGCTGAAGGA 
GATAGCGCGC GGGCTCGAGA GCTCCGGCCA CCGGTTCCTG TGGGTGGTGC 
GGAGCCCGCG TCAGGATCCG GCCAATCTGC TCGAGCATCT GCCGGAGCCA 
GACCTGGCGG CGCTGCTCCC CGAGGGGTTC TTGGAGAGGA CGGCGGACAA 
AGGAATGGTG GTCAAGTCAT GGGCGCCGCA GGCCAAGGTG CTACGCCACG 
CGGCGACGGC CGCGTTCGTC ACGCACTGCG GGTGGAACTC GACGCTGGAG 
GGGATCACGG CGGGGGTGCC GCTGCTGTGC TGGCCGCTGT ACGCGGAGCA 
GAGGATGAAC AAGGTGTTCA TCGTGGAGGA GATGAAGGTG GGCGTGGTGA 
TCGATGGCTA CGACGAGGAG ATGGTGAGCG CGGAGGAGGT GGAGGCGAAG 
GTGAGGCTGG TGATGGAGTC GGAGGAAGGG GGGAAGCTAC TGGAGAGGCT 
GGCCGTGGCG AGGGCGAAGG CCGTGGAGGC GCTCGCGGAA GAAGGGCCCT 
CGCGTGTGGC GTTTGACGAG TTTATCGATC GTTTGGTGAC GTCCGAGTGA 
TCAATCACTC ATCGTTCGGC ATTTGGGCGC TTAGCTTACC TTGTTTCCTA 
GAGGACCTGA GAAGATGATG CGGTTCGTGT TAGCGGACGA CCGTGTTGGA 
CTTGCACTCT GTGTGCTCCT GCGCCTTCTG CCCCGTTCAT TCACAAATAA 
AAAAAGTTAG TATCTGTGTT CGCC

Gene models with high sequence identity

AT3G16520.3 [+] show detail - UDP-glucosyl transferase 88A1
E-value: 8e-70; Score: 261.00

InterPro Scan Digest

Program	Description	E-value
FPrintScan	PRICHEXTENSN	1e-09
FPrintScan	PRICHEXTENSN	1e-09
FPrintScan	PRICHEXTENSN	1e-09
FPrintScan	PRICHEXTENSN	1e-09
FPrintScan	PRICHEXTENSN	1e-09
FPrintScan	PRICHEXTENSN	1e-09
FPrintScan	PRICHEXTENSN	6.5e-10
FPrintScan	PRICHEXTENSN	6.5e-10
FPrintScan	PRICHEXTENSN	6.5e-10
FPrintScan	PRICHEXTENSN	6.5e-10
Gene3D	no description	7.3e-14
HMMPanther	UDP-GLUCOSYLTRANSFERASE	5.1e-114
HMMPanther	UDP-glucuronosyl/UDP-glucosyltransferase	5.1e-114
HMMPfam	UDP-glucuronosyl/UDP-glucosyltransferase	6.9e-29
superfamily	UDP-Glycosyltransferase/glycogen phosphorylas	9.3e-52
PatternScan	UDP-glucuronosyl/UDP-glucosyltransferase	0

See the detailed result >

AT3G16520.3

Model type: Protein coding
Short Description: UDP-glucosyl transferase 88A1
Computational Description: UDP-glucosyl transferase 88A1 (UGT88A1); FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1); Has 7523 Blast hits to 7470 proteins in 455 species: Archae - 0; Bacteria - 255; Metazoa - 2062; Fungi - 26; Plants - 5000; Viruses - 120; Other Eukaryotes - 60 (source: NCBI BLink).
Link: InterPro Scan - TAIR