K05010

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K05010

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K05010

Determination of introduced cDNA(s)

J013149L15 - Rice Full-length cDNAs - Original: J013149L15

full reading [+] show sequence

GTGCTGATCC CCAGACGCCG GCGGCTACTG CGTTTGCGAT GCCCGCCGCC 
GCCGCCGCCG CCGCGCCGCC CAATCCCAAC GTTCTGCAGC TAGCCCCACG 
CCTCCGAGGC CTCGTCTCCT TCCCCTCCTC ATACTCCTCC TCATCGCCGT 
TCTCCAACCG CCTCCGCCTC CGCCTCCCCC GCGCCGCCTC CATGTCCGCC 
GAGGCGCGGG TGCCCGTGGC GCCGCCGGCC CACCCCACCT ACGACCTCAA 
GGCCGTCATC AACCTCGCCC TATCCGAGGA CGCCGGCGAC CGAGGGGATG 
TATCTTGCTT GGCAACCATA CCTTCTGACG TGAAAGCTGA AGCCACCTTT 
ATTGCAAAGG AGGATGGTGT TGTCGCTGGA ATAAGCCTAG CAGATATGAT 
ATTTAAGCAA GTTGATCCAT CATTGAAGGT TGAATGGTTT GAAAGTGATG 
GAAATTATGT CCATAAGGGA TTGCAATTTG GGAGAGTATA TGGTTGTGCT 
CGCAACATTA TTGTTGCTGA AAGAGTTGTG CTCAATTTCA TGCAAAGAAT 
GAGTGGAATT GCTACAATGA CAAAGGCCAT GGCCGACGCT GCTCATCCAG 
CATGCATACT GGAAACAAGG AAAACAGCTC CAGGTTTACG CCTCGTTGAC 
AAGTGGGCAG TACTAATTGG TGGTGGAAAG AATCACAGAA TTGGCTTATT 
TGATATGGTT ATGATAAAGG ATAATCATAT TTCTGTTGCT GGGGGCATAA 
CAAATGCAAT GAAATTTGTT GATCGATTCT TGGCGAAGGA AAAGCTTGCA 
CTTCCTGTTG AGGTTGAGAC AAGAACACTT CAGGAAGTAA AAGATTTATT 
GGAGTATGCT GCTGAGAACA ATACCTCTTT AACTCGTATA ATGTTGGATA 
ATATGGTTGT CCCTCTTGGT AACGGTGATA TTGATGTATC AATGCTCAAG 
GATGCCGTGG AGTTGATAAA TGGTAGATTT GAGACTGAGG CATCTGGAAA 
TGTGACTATT GACACAGTGA AGAAAATTGG AGAAACGGGG GTTACCTATA 
TTTCAAGTGG AGCATTAACA CATTCTGTAA AGGCACTTGA TATATCTCTT 
AAGATAGACA CTGAACTCGC TCTCCAAGTT GGAAGGCGCA CAAATCGCGC 
CTGACTCTAC AGAACTAATG TAACCTTGCA AGATCTGCAG GGTGTTTCTG 
TGGCGTGGCT TGCCAGTCTA TCAATCCATG CCCTTCTCAT CAACTTGTAA 
GCGTTGAGTG TACAACAAAG AATGTGTTTT CCCATATTTA TGGGATATAA 
ACCAACACCA CATAATACAG CAAAATAATA ACATTACCTT GTAGGCTTGC 
CTACCGTCCT AGCATTTGTA TTTGGTAGAA AAAAAACTGC AGATTGCGGC 
AAGTTATCGA ATTTTACTCA GGTATTAATA AGACTTTTTG CACCATGAAA 
AATTAGCAAG CTGGACACTG TAAATGGGAT GTGCGCGGCA TTGAACTTGC 
AGTTCTGCAC TTGTGTTTGA CCAAACAAAC ACTATAAAAT GGTGATGTTT 
GTGATCTACA AAAGAAAAGG AAGTCTAACA CAGCAGTGCA TTCTTTTTCA 
GATTCC

Gene models with high sequence identity

AT2G01350.4 [+] show detail - quinolinate phoshoribosyltransferase
E-value: 5e-140; Score: 494.00

InterPro Scan Digest

Program	Description	E-value
Gene3D	no description	3.2e-25
Gene3D	Aldolase-type TIM barrel	3.5e-42
HMMTigr	Nicotinate-nucleotide pyrophosphorylase	1.5e-97
HMMPfam	Quinolinate phosphoribosyl transferase, C-terminal domain	7.7e-58
HMMPfam	Quinolinate phosphoribosyl transferase, N-terminal	6.3e-25
superfamily	Quinolinate phosphoribosyl transferase, C-terminal domain	8.7e-42
superfamily	Nicotinate/Quinolinate PRTase C-terminal doma	3.6e-34

See the detailed result >

AT2G01350.4

Model type: Protein coding
Short Description: quinolinate phoshoribosyltransferase
Curator Summary: At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description: quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5862 Blast hits to 5862 proteins in 1918 species: Archae - 184; Bacteria - 3596; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink).
Link: InterPro Scan - TAIR