K05036

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K05036

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K05036

Determination of introduced cDNA(s)

  • J033149O18 - Rice Full-length cDNAs - Original: J033149O18

    full reading [+] show sequence

    Nucleotide sequence: J033149O18 - full reading 
    GAGCCGGTGT CCTCGCTTCT CTCCTCGCCA CTTCCCCTAT TCGGTCAGGC 
    ACATCTCCCC ACCCCCCAAC AATCATCGAG GAAGAAGAGG GAGGGACGAC 
    GATGTCGATG CCGGAGGCGG GGCGCTCGGA GAGGGACGGG CGGGAGCAGG 
    ACGACGACTA CGAGCAGCAG CAGGCCAGGG TGCTCATGGC ACTGATGCAG 
    GGCTTCTGCG CCGCACGCTA CCGGAAGGCC GACAACATCC CGTGCCCCAT 
    CGTCCAGGGG CTATACTTGG GATCTGTTGG GGCAGCAATG AACAAGGATG 
    CTTTAAAGAG CTTGAACATA ACCCATATCT TGATTGTTGC CAGATCATTA 
    AATCCAGCCT TTGCAGCTGA ATTTAACTAC AAGAAGATTG AAGTACTTGA 
    CAGCCCAGAC ATTGATTTGG CAAAGCATTT TGATGAATGC TTTAGTTTCA 
    TTGATGAATC TATCAGCTCT GGTGGCAATG TTCTGGTTCA TTGCTTTGCT 
    GGACGGTCAA GAAGTGTCAC GATTATTGTT GCATATCTGA TGAAGAAGCA 
    TCAAATGAGC CTTGAGAACG CGTTGTCGCT AGTTAGAAGC AAACGACCTC 
    AAGTGGCTCC TAATGAGGGA TTCATGTCTC AGCTGGAGAA CTTTGAGAAA 
    TCCATGCAAG TGGAGCAGGA GAGGAAACTT ATGCAACCTG TGCAGAACTA 
    ACTATAGGCG TAAATGCATG TGTTGAGAAT ACACTGCTAA TAGCTTGCGG 
    AGCAGTCTAG AGATCAAGGC CGTAGTGCAA AATGTTATGA ATTCTAGCTG 
    CGGTATTATT AGCAGTCGTC TAATTGATGC TGTAAGCTTC AAGTGAAATT 
    GGTGGTCAAT GCAATGAAAT ACTCTGGGAT CCAGTTCTGT GAGGGTAACC

    Gene models with high sequence identity

    1. AT3G23610.3 [+] show detail - dual specificity protein phosphatase 1
      E-value: 8e-48; Score: 187.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 2e-48
    HMMPanther SKRP-RELATED DUAL SPECIFICITY PHOSPHATASE 4.8e-78
    HMMPanther DUAL SPECIFICITY PROTEIN PHOSPHATASE 4.8e-78
    superfamily (Phosphotyrosine protein) phosphatases II 3.3e-48
    HMMPfam Dual specificity phosphatase, catalytic domain 3.4e-36
    HMMSmart Dual specificity phosphatase, subgroup, catalytic domain 1e-45
    HMMSmart Protein-tyrosine phosphatase, catalytic 0.006
    ProfileScan Dual specificity phosphatase, subgroup, catalytic domain 40.54
    ProfileScan Dual-specific/protein-tyrosine phosphatase, conserved region 14.633

    See the detailed result >

    AT3G23610.3

    Model type
    Protein coding
    Short Description
    dual specificity protein phosphatase 1
    Curator Summary
    Encodes a dual specificity protein phosphatase whose activity is modulated by CaM binding.
    Computational Description
    dual specificity protein phosphatase 1 (DSPTP1); CONTAINS InterPro DOMAIN/s: Dual specificity phosphatase (InterPro:IPR020417), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: MAPK phosphatase 2 (TAIR:AT3G06110.3).
    Link
    InterPro Scan - TAIR