K05205

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K05205

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K05205

Determination of introduced cDNA(s)

  • J013151F12 - Rice Full-length cDNAs - Original: J013151F12

    full reading [+] show sequence

    Nucleotide sequence: J013151F12 - full reading 
    TTGGGAACAG AACAGAACAG ATGAAACTTG ACTTCTTCCT TCCGATGCTC 
    TCTCTTCTTC AACCTCTGTA TCTCTCTTCT CTTCTCCAAT CTCTAGCTAT 
    GTCTTCTTCT CCAACCTACT GCTGATTCTC AGTCTTGATT CCTTTTCCCC 
    CATTTGTATC CCCAAATACT CATGTATCGA GTGTTGGAGG AAGAATTGTT 
    TGCTTGTGCA GGAATTCACT AAATCACATG GAGTGGATTC GTAACACTAG 
    CCTGACAGGG TGAATACATC CATTCTTCCT TTTTTCAGAT AAATCTGGTT 
    GACTAGGTAG GTAGGTGAGA AATTCAGTAT TTTCCATCCA ATTCACTGGC 
    CCGTAAGCCT TTCAAATTTT GCCATCAGGA CTGCGAATTT CTTCATTCCG 
    TGCTACTTCC CTCAGTTTTG AGTGTGTCAT CCGTCTGTGT TCGCCTGTCA 
    GCTGGCACTG CCACTCTTGC TAGGTGTAGC CGACACCTGC CATTGCCGCT 
    CAGCCGGAAA ACATTTTCCC CTCCACAAGA GACCAAATCT ATGCAATCAG 
    ATCATCAAGA ACCAGATCGC CATGGCTGAA AGGCTCAGAA TCAACTCTGG 
    AGGAGTTTAT ACTACGATTA CCAAAGAAAA GCACAAAATT GAGAGCATGC 
    TAGAACAAAC AAGCACAAGA GAATGTACGG GACAGTGGCG TCCATCGGCG 
    GGCAGGGAGC AGGAAACAAA CTCCATCCCA CCGAATTTCG CTTGACTTTC 
    GCTTGACTTT GCCGCTGTTT TTCTGATCTA AAAGAATCCA AAGAAAAGGA 
    GAAGGGGATC CTTGTTGGGA GCAGAGCCAT CGCCATTGCC ATGGCGCTGA 
    ACCGATTCAC CCAATGGCTG AGGCCAGTGA GCATGGTGCA TGTGGCGACG 
    ATGGACGAGC TCTCGAGTAC CCTAGGAGCC AGCGCTGGCG AGCGCAGCTG 
    TGGAACGCCG GGAACAGCCA CTGCCACCAT GGAAGCAGTC GTGCGGAGCC 
    CACAGCAGAA CGGCTGAGGA AGGGCATTCG ATATAGTTAC CGTGCCATCT 
    GACGGCAGTG GGTGCCTGTC CACTGGCAGG AGGAGCTGTC GCTGGAGGCT 
    AGAGCTGCAG ACGGACGACG ACCCCCAAGA GCTGCTTCAC GGTCCTCGTG 
    CGGTGCTACT GTTGGGATGC CCGAGGCAAG GGGCCAGCGG GCTGAACGGC 
    AACACCAGCG ATGGGGTGAA CAGATGGACG TGTCAGCAGG CAGACGGACG 
    GACGGACAAA CTTAGACAGA CGATGCGCTC GAACCGAAAG GAAGTGGCAC 
    GGAATGAAGA AATTCGCAGT CCTGATGGTA AAATTGAAAG GCTTATAGAT 
    CAAATGGTAA TTTCTTAAAG GGCGGCAAAT TGGATGGCAA ATACTGTTAC 
    AAAGGATCTT CAGTTTGGTG CAATTTATGT TCAGCAAGTT CTATCATGTG 
    AAGTATAATC TCCATGCCTG GAACAGTGCT GAATGCTTTA TCTGTTTCTG 
    TACAGTAAAA TGGGGCTTGG TTGTAAGCCC TTTGTTTGTG CAAAATAATC 
    TTCACGTCCT TTTTATGTAA TGTAAATGAT CAAAACTCTC ATGCATGTTA 
    TATCTTACGA CGTTTGCAAT GACCTCAGGG AACTTCTACA TACAAAGAGC 
    AGAAGGGAAG AGACCTATGA CAAACTTCAG AGTGTTTTAG GTGACTCCTT 
    GACAAGCTGT GAAATAGAAT CTGCTACGGA GGAAATGTCC TCTTGCCTCC 
    AAGCTTCTAC TTTGTTGCCA CATTCTGCGG TGGAAGAGAT GTTTAACGTA 
    GAGGTTGTCG AGGAGCAATC CAGGTCTTGT GGTGGTTTGT CAGTTGCAAT 
    GGACAACTCT CTTAGTCCTG CGCACACTCT TATTCAGATC CAGTGTGGTG 
    ACCATAAAGG CCTCGTATAT GACATCATGA GAACACTCAA GGACTGTAAC 
    ATCCAGATTT CGTATGGACG ATTCTATGCC AGCCAGAATG GGAGCTGTGA 
    GGTAGATTTG TTTGCTGTGC AATCAGATGG GAAGAAGATC GTTGACCAGC 
    ACAAGCAAAG AGCGCTGTGT TGTCGGCTGA GGACAGAGCT CCACCGTCCG 
    CTGCGCGTGG CATTGGTAAA CAGAGGCCCT GACACGGAAC TGCTGGTGGC 
    TAACCCAGTG GAGGTGTCGG GCAAGGGTAG ACCGCTGGTG TTCTACGACA 
    TCACCCTTGC TCTCAAGAAG CTTCACAAAC GGATCTTCTT GGCTGAGATT 
    GGTCGGCATG TGGTGGGTGA TAGGGAATGG GAGGTTTACA GGGTGCACCT 
    TGGTGAGGGA GATCATTCTT CATTGCGGAG CAAGATTGTT GATGGAGTCA 
    CCAACATGCT CATGGGCTGG GACGACACTC CTCCATCCTA ATCCTACTAG 
    TAGTAGTTCT AGTTAGTTTT TTTATGGAAC ACACGTCCTT TGCCTTGTAC 
    ATAGTTGGTA GTGGCTGCTG TAAATTGTGT GCCTTGTTAA GTCGTTCGTG 
    GTAGAATGCG TTGGCAGTAG CTAGCTTTGA CTAATCAATC AGCAGCTAAT 
    TTCAGTCTGT TTAGTTAGGG AGCACTCCCC TCTAGTTGTA TCACTATCAA 
    AACTGAATAG TGCTCAAGTT ATCTAACAGG AGGAAATGCT TACTCCTAAT 
    T

    Gene models with high sequence identity

    1. AT2G36840.1 [+] show detail - ACT-like superfamily protein
      E-value: 1e-69; Score: 261.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G36840.1

    Model type
    Protein coding
    Short Description
    ACT-like superfamily protein
    Computational Description
    ACT-like superfamily protein; FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain-containing protein (TAIR:AT2G39570.1); Has 798 Blast hits to 670 proteins in 149 species: Archae - 0; Bacteria - 272; Metazoa - 0; Fungi - 7; Plants - 430; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR