K05229

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K05229

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K05229

Determination of introduced cDNA(s)

  • J013000B06 - Rice Full-length cDNAs - Original: J013000B06

    full reading [+] show sequence

    Nucleotide sequence: J013000B06 - full reading 
    GGCTCTCAAA ACCCTCTCCT AACCCTAGCC GCCGCCGCAG CCGCAGCCGC 
    AGCCGCGCGT CGTCTCCTCC GCCCGCGAGC TCCTCTTCCC GCCGGCGAGA 
    GATCAGGAGC ACGCAAGGCG CGCGGCCATG GCGTCGGAGA CCGAGACGTT 
    CGCCTTCCAG GCCGAGATCA ACCAGCTGCT GTCCCTCATC ATCAACACCT 
    TCTACTCCAA CAAGGAGATC TTCCTCCGCG AGCTCATCTC CAACTCCTCC 
    GATGCATTGG ATAAGATTAG GTTCGAGAGC CTCACGGACA AGAGCAAGCT 
    CGATGCGCAG CCGGAGCTGT TCATCCACAT TGTCCCCGAC AAGGCTAGCA 
    ACACCCTGTC GATCATCGAC AGTGGTGTCG GCATGACCAA GTCGGACCTC 
    GTCAACAACC TCGGTACCAT CGCCAGGTCG GGGACCAAGG AGTTCATGGA 
    GGCGCTCGCT GCTGGTGCTG ATGTGTCCAT GATTGGGCAG TTTGGTGTCG 
    GGTTCTACTC CGCCTACCTT GTTGCTGAGA GGGTTGTTGT GACCACCAAG 
    CACAACGACG ACGAGCAGTA TGTGTGGGAG TCACAGGCCG GTGGGTCCTT 
    CACTGTTACA CGTGATACCT CTGGTGAGCA GCTTGGACGG GGTACTAAGA 
    TCACCCTCTA CCTCAAGGAT GATCAGCTGG AATACCTTGA GGAACGTCGC 
    CTCAAGGATC TGGTGAAGAA GCATTCTGAG TTCATCAGCT ACCCTATCTC 
    CTTATGGACT GAGAAGACAA CCGAGAAGGA GATTTCTGAT GATGAAGACG 
    AGGAAGAGAA GAAGGATGCT GAGGAGGGAA AGGTTGAGGA TGTTGATGAG 
    GAGAAGGAAG AGAAAGAGAA GAAAAAGAAG AAGATCAAGG AAGTCTCTCA 
    TGAGTGGAAC GTGATGAACA AGCAGAAACC TATTTGGTTG AGGAAGCCAG 
    AGGAGATCAC CAAGGAAGAG TATGCTGCTT TCTACAAGAG CTTGACAAAC 
    GACTGGGAGG AACATCTGGC TGTCAAGCAC TTCTCTGTGG AGGGTCAGCT 
    TGAATTCAAG GCCATCCTGT TTGTACCAAA GAGAGCGCCA TTTGACCTCT 
    TTGACACCAG GAAGAAGCAA AACAACATCA AGCTGTACGT ACGCCGGGTG 
    TTTATCATGG ACAACTGTGA GGAGTTGATC CCAGAGTGGC TCAGCTTTGT 
    CAAGGGCATT GTTGATTCTG AAGACCTTCC CCTCAACATC TCACGTGAGA 
    TGCTCCAGCA GAACAAGATC CTGAAGGTGA TCCGCAAGAA CCTTGTGAAG 
    AAGTGCGTGG AGCTCTTCTT TGAGATCGCT GAGAACAAGG AAGACTACAA 
    CAAGTTCTAC GAGGCCTTCT CCAAGAATCT CAAGCTTGGC ATCCATGAGG 
    ACTCCACCAA CAGGACCAAG ATTGCTGAGC TCCTGAGGTA TCACTCCACC 
    AAGAGTGGTG ATGAGTTGAC CAGCCTCAAG GACTACGTAA CCCGGATGAA 
    GGAGGGCCAG AGTGAGATCT ATTACATCAC TGGTGAGAGC AAGAAGGCTG 
    TTGAGAACTC CCCCTTCCTT GAGAAGCTGA AGAAGAAGGG ATATGAGGTC 
    CTGTACATGG TTGATGCCAT TGATGAGTAC GCTGTTGGTC AGCTTAAGGA 
    GTTTGAGGGC AAGAAGCTCG TCTCTGCCAC CAAGGAAGGT CTGAAGCTTG 
    ATGAGAGTGA GGACGAGAAG AAGCGGCAGG AGGAACTCAA GGAGAAGTTC 
    GAGGGTCTGT GCAAGGTGAT CAAGGAGGTG CTCGGTGACA AGGTGGAGAA 
    GGTTGTTGTC TCTGACCGTG TGGTGGACTC TCCCTGCTGT CTAGTCACTG 
    GGGAGTATGG CTGGACTGCT AACATGGAGA GGATCATGAA GGCCCAGGCT 
    CTGAGGGACT CCAGCATGGC CGGCTACATG TCGAGCAAGA AGACCATGGA 
    GATCAACCCG GAGAATTCCA TCATGGACGA GCTCCGCAAG CGTGCCGATG 
    CTGACAAGAA CGACAAGTCT GTGAAGGACC TGGTGATGCT GCTCTTCGAG 
    ACTGCCCTCC TGACCTCCGG CTTCAGCCTT GAGGACCCAA CACCTTCGGC 
    ACCAGGATCC ACCGGATGCT CAAGCTCGGC CTGAGCATCG ACGAGGACGA 
    GTCTGCTGAG GCTGACGCCG ACATGCCGCC GCTGGAGGAC GACGCCGGCG 
    AGAGCAAGAT GGAGGAGGTC GACTAAGCGC CATGGTTGTC ATTCGGCCCC 
    CATCTCCTGG AGCCCTAGTT CTCTATAGCT TTATCTGACT CTGTGCTCTT 
    CGCCATTTTT GCTATGCTGG ATGTATCGGT ATTGCCGTAT CTTAGCGCCT 
    GAACATTTCG TGGTATTTGC TCAAACAGTT ACGTTTTAAA TTTAAATATG 
    CTAGTTAATT

    Gene models with high sequence identity

    1. AT5G56030.1 [+] show detail - heat shock protein 81-2
      E-value: 0; Score: 999.99

     

    InterPro Scan Digest

    Program Description E-value
    FPrintScan Heat shock protein Hsp90, N-terminal 3.4e-83
    FPrintScan Heat shock protein Hsp90, N-terminal 3.4e-83
    FPrintScan Heat shock protein Hsp90, N-terminal 3.4e-83
    FPrintScan Heat shock protein Hsp90, N-terminal 3.4e-83
    FPrintScan Heat shock protein Hsp90, N-terminal 3.4e-83
    FPrintScan Heat shock protein Hsp90, N-terminal 3.4e-83
    FPrintScan Heat shock protein Hsp90, N-terminal 3.4e-83
    HAMAP Chaperone protein htpG 26.765
    Coil coiled-coil 0
    Coil coiled-coil 0
    HMMPanther gb def: Gravity specific protein GSC 381 (Fra 1.5e-29
    HMMPanther Chaperone protein htpG 1.5e-29
    HMMPanther Chaperone protein htpG 0
    HMMPfam Heat shock protein Hsp90, C-terminal 3.8e-254
    HMMPfam ATPase-like, ATP-binding domain 3.8e-10
    superfamily Ribosomal protein S5 domain 2-type fold 5.2e-113
    superfamily ATPase-like, ATP-binding domain 1.2e-72
    superfamily HSP90 C-terminal domain (C-terminal part of P 1.7e-36
    HMMPIR Chaperone protein htpG 0
    HMMSmart ATPase-like, ATP-binding domain 4.6e-08
    Gene3D ATPase-like, ATP-binding domain 2.7e-87
    PatternScan Heat shock protein Hsp90, conserved site 0

    See the detailed result >

    AT5G56030.1

    Model type
    Protein coding
    Short Description
    heat shock protein 81-2
    Curator Summary
    A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.
    Computational Description
    heat shock protein 81-2 (HSP81-2); FUNCTIONS IN: protein binding, ATP binding; INVOLVED IN: in 9 processes; LOCATED IN: cytosol, mitochondrion, cell wall, nucleus; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chaperone protein htpG (InterPro:IPR001404), Heat shock protein Hsp90, conserved site (InterPro:IPR019805), Heat shock protein Hsp90, C-terminal (InterPro:IPR020576), Heat shock protein Hsp90, N-terminal (InterPro:IPR020575), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), ATPase-like, ATP-binding domain (InterPro:IPR003594); BEST Arabidopsis thaliana protein match is: heat shock protein 81-3 (TAIR:AT5G56010.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR