K05307

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K05307

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K05307

Determination of introduced cDNA(s)

J013042D18 - Rice Full-length cDNAs - Original: J013042D18

full reading [+] show sequence

ATGGGGCCAA TGAGATTATT AGAAGGCATC ATAAGCAGAG AAACAGAGAA 
TCTGTTGGCC GTGGAATCAT AAGTGGAGAA AAGACACAAG AAAAGCCTCT 
GAACCAGTTC AGGCATCAGG CACAAGATCA ACATTCTAGC TATGCTTTTC 
GTATGAAGCA GACACATCTA GATCATAGAG ATAGAGTTAA TGAAGTACAG 
GCAGATTCTA TTGATCCCAC AGTTTTTAGT GAGTCAAGAT GCATTGCGCT 
GATTGATGAG ACTACTGCGA CGCGTATAAA TTGCACAACG GTGCACTCTG 
TTGGACCCAA ACCTATAAAT GTAGATAAGA ATCAGGCACA GGCTCCCAAC 
TCCAAGCGGA TCATACAACA GGCACAAAAA CAGCCTTCTT ATATTGCAAT 
TTCTCAAGAG AATGCTCAGG ATAAGCATGC AGATGGTGTG GTTCATGTCC 
AGGAAAAGCA ATTGAGGACT GCAAGTCAAG TAAACCATAG ACAAGAGACA 
TGTGCTCAAC TGGACAATCA GACTGTTGCA GGGGATAGCA GTGGGAGAAT 
TAGATGCCCG GAAAAAGAAC AATCGGAACC TTTTAGCTGC ACAATTCGCA 
AGAGAAAAAC GAAGAGTTTG TTGGCTAATT CAAATTCAGG TCTTGAACTT 
AGGCGCAGTA AACGTTTGGC CAAAGATTCT CCTGCTGCAA AAGACAAAAA 
ACACAGCAAA AACAAGTCTT TTGAGCAGCA GGTTTCTCAA AATGACCAAG 
TATCTGCTGC AGTCATGGAT ACTGAATCAA TACACAGGGA TCCTGTTGAG 
AGGCAAGCTG CATCTTCAAC TGGCCACATG CCAGCTGCCA TCACAGACAG 
TGAACCATCA GAAAATGAGC CTGATGATCT GTATATGCCT TCTCCAGATC 
AGAGTTTGTC TAACTCTCCA GATATCGACA GAATCATTAA CAGCATATGC 
CCTAGTTCAT CCCCTAGGCA TATGACCCCT GAAAAAGTCT CTAATGAGTT 
TGACAACGTC CAGTTAACTA CACCACCACC TTCCGATATC GACATGTCTG 
ATCCTGAGCA TTTTGCATGT AACTACGTTC CGCAGGAAGT TAGAAAGGCC 
CTTGCGAAGC TAAGATCTAG TAATTCATCA TTTGAGCGTG CGATGTCACA 
GGCAAGTTCT GGTGATGTGC ATGCATTAAG TGATTCTGAA GATTGCGACG 
AACGCTGGAA TGTTGGTACC AAGAGGAATC AAGGGTGTGG TCGTGGTCGT 
GGTCTTACAC TCTGTCTCAA GGTGTGGAAT TTGGCTAAGG GTGTCCGCAT 
TCCAGTGCTA TTGAACGCTT CGGGGGAGCC TGTTGGGAAA GAGGCAGGCA 
CCTTATCTAC CTTTCTGGGT GCATTAGCAC GTGACGGAAT ATTGGCACCT 
CTGACACATC AAGATTGGAG ACGTGTTCCA GAGAAAAACA AGGATGTGAT 
GTATCATATT GTCAAGCTCA AATTTGACAT TGCTCCAGCT GCTGAATTCT 
GGATCATGAA GTGTATAGGA AGAAAGTGGA AGAGTTGGAA AGCTCTCTTA 
AAACAAAAAC ATTATGATAC TCATGAAACG GTGGAGGAAT GCCTTGCTGA 
TCAAAATCCT CGCGTTCTCA AGGAACAGTG GCAATATTTA GTTGCATATT 
GGGGTACGGA AAAAGCGAAG GCTGTGAGTA GTCGAAATAA AGCTTGTCGG 
GCAAATGTAA CCGCTACGCA TACTGCAGGA ACAAAGAGCT TTGCACGGAT 
AATTGAGGAG GAGAAGCAGA AGCGGCCTAA CAATGAGGAG CCCACTGCTG 
CGGATTTGTT CCTATTGACT CATACACACA GAAACGGGAA GCCTATGAAG 
AAGGAAAAAG CTGATATCAT TGCACGAGTC CGTGAACAAT CTCATAAGCA 
AGCCGAATGC TCAGGAAGTG ACTCTGCAGC ACACAAAGTC GGACTTGAAT 
CCTGCTCCAT TGGCCTGCGT GGGAAGAGGG GTCATCGTCG GAAGGCAGTC 
TTGCAGGCAT CCTTCAAGGA AGCTGAGGAG GCTAAAAGAA AGGCTGAAGA 
CGAGGCAGCG ACGCTGAGGA AGAAGATGGT GGCAATGGAA GAAAGTCAGA 
AGAAACTGCA AGAGGATTTG GCGAATATGA AGAGTACAGT TAGTGCTATG 
CAGAAGACGA CGTCAACTGG TGACCTATCG GATGGTCAAA CGCAAAACTT 
TCCACAGGTC CAAAATTCAC GAAGCGCTCA TGAGATTTTG CAGCCATATC 
TTGACTACTC TGCACTGTAC GATCCTTCTG CCTCCCCTAG TCCACGATTT 
CGATGATAAT CGCACCACAG ACAATGCCAA TATGCATGGT TGATTCCATC 
TTGATCGTGG AATGGTGTAT GAAACGAAGA GGTTTAGACG TTTAGTTGGC 
CGTTCATGTG TAATGTTGGC TCTCTAAACC CGGAGCCCAG TGCTTGTACT 
CTTCTGTTTT ATTGGCTACT GTAACAGGAT ACTCTCTTCT GTTTTGTTTA 
CACTGACTAG AACTACTTCA CTTCGC

Gene models with high sequence identity

AT1G40087.1 [+] show detail - Plant transposase (Ptta/En/Spm family)
E-value: 2e-14; Score: 78.60

InterPro Scan Digest

Program	Description	E-value
Coil	coiled-coil	0
HMMPfam	Transposase_24	4.7e-28

See the detailed result >

AT1G40087.1

Model type: Protein coding
Short Description: Plant transposase (Ptta/En/Spm family)
Computational Description: Plant transposase (Ptta/En/Spm family); CONTAINS InterPro DOMAIN/s: Transposase, Ptta/En/Spm, plant (InterPro:IPR004252); BEST Arabidopsis thaliana protein match is: Plant transposase (Ptta/En/Spm family) (TAIR:AT3G30200.1); Has 227 Blast hits to 225 proteins in 11 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 225; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR