K05329

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K05329

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K05329

Determination of introduced cDNA(s)

J023108B05 - Rice Full-length cDNAs - Original: J023108B05

full reading [+] show sequence

GAGCCTTCCG CTGCTGCTGG ACGAGTGGAT GACGAGCACT AGGCCCATCT 
TGTTGTTTAT CCTTTTTCTG AACCTCACAA TGAGCGATGC TACTGAAATT 
CAGCTGCAGA TTACAGGTGT CCGAGGCCAA GAAGACGTGG TAGCAGAGTC 
TGACAAGAGC ACGTCTCGAG CAGATGGAAC TGCGGCGGCG GCGGCGGCGG 
CGGCGCCGCT GCCGCCTGTG TCCAGCCAGC GGCTGCGGTG GTGGGCGGTG 
GTCCTTGCCA ACATCGTGTT CGTCCTCGGC GGGCAGAGCG TGGCCACGCT 
CCTCGGCCGG ATTTACTACG ACCAGGGCGG CGGCAGCTTG TGGCTGGCGA 
CGGTGGTGCA GTCCTGCGGC GCGCCGCTCG CCGTCCCACT GCTGCTCTAC 
TTCCGGCGGC CAGAGGCCTC CCCGGTGGCA CGTCCGCCGC TGCTCAAGAT 
CGCTGCCATC TACGCCGGCC TTGGCGTCCT CCTCGCCGGC GACAACCTGA 
TGTACTCCTA CGCGCTCCTC TACCTGCCGC TGTCGACGTA CTCCCTCGTC 
TGCGCCACCC AGCTCTGCTT CAACGCCGTC TTCTCCTACT TCCTCAACAA 
GGAGAGGTTC ACCGCGCTCG TGCTCAACTC CGTCGTGCTG CTCACCTTCT 
CCGCCGCGCT CGTCGGCGTG AGCCACTCCT CGGAGGAGAC CAACAGCAGC 
GTCCCGGAGG GCAAGTTCGC GCTGGGGTTC GTCCTGGCGC TGTCGGCGTC 
GGCGGCGTTC GCCCTGATCC TGTCCCTGAT GCAGCTCACG TTCGACACGG 
TGCTCAGGAG CAACGCGGCA CACGCCGTGC TGGAGCTGCA GCTCTGGAGC 
AACGCCGCCG CGTCGTGCGT GTCGGTGGCC GGGCTGTTCA TCTCCGGCGA 
GTGGAGCTCC CTGACGGCGG AGATGGACGG GTACAAGAAG GGCGAGGTGG 
CCTACGGGAT GACGCTGGCG TGGACGGCCA TCTCGTGGCA GCTCGCCACG 
ATGGGCATGG TGGGGCTCGT CGCGACGGTG TCGTCGCTGT TCACGAACGT 
GATCAGCACG GTGGGGATGC CGCTGTCGCC GATCATGGCG GTGATCTTCC 
TCGGCGACCG GATGGACGGT GCCAAAGTGA TAGCCATGCT CATTGGCATC 
TGGGGATTCT TGTCCTACGT TTACCAGCAC TACCTCGATG ACGCCAAGAG 
CAAGAACACA GCTGGGTCAG CTGACGTCAC ACAAACTTCA GAAGCAAAAC 
TCTGAAGCCT GATACGCCTG ATAGTGATAC CCAGAGTGAA TTTTACTGTA 
CTTGATCTCT TTTTTTTCAC GGAATCAATT GGAAATTTGG AATACTGGTC 
TTATCTTCCC T

Gene models with high sequence identity

AT1G44750.1 [+] show detail - purine permease 11
E-value: 4e-88; Score: 322.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Multidrug resistance efflux transporter EmrE	0.00000011
superfamily	Multidrug resistance efflux transporter EmrE	0.00014
Coil	coiled-coil	0
HMMPfam	Protein of unknown function DUF250	1e-28

See the detailed result >

AT1G44750.1

Model type: Protein coding
Short Description: purine permease 11
Curator Summary: Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.
Computational Description: purine permease 11 (PUP11); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: Drug/metabolite transporter superfamily protein (TAIR:AT4G08700.1); Has 428 Blast hits to 419 proteins in 52 species: Archae - 0; Bacteria - 15; Metazoa - 14; Fungi - 21; Plants - 366; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link: InterPro Scan - TAIR

J013149I12 - Rice Full-length cDNAs - Original: J013149I12

full reading [+] show sequence

GGGAGACCCC TCCTCCCCTC GGCAACGTAA CACAAGAGAA GAAGAGATCG 
CCATGTCCAA CGTGCCCACC TCCCTCCGCG ACTCCTCCCT CACCGTCTTC 
CGCCTCGCCA TCTCCAGCTC CGACCCCTGG CCCTTCTCCC TTTAACCCCA 
TCAAACGCTT CTTCCTCTTC CAAGAAGATC ACAAGCTTCT TCGTGTTCTT 
GTTCTTCTTC GGATCACTCG GTTGGTTTCT TGGTTTCTTG GTTTCTTGGA 
TTGTTGCGAG ATGCACGGGA AGCATCAGCA TCAGCAGCAG CAGCAGCAGC 
AGGGGGGGAT GGTGGTGGTG GCGCCGAAGG GGTGCGTGAC GGTGAGGGTG 
GGGGCGGAGG GGGAGGAGCA GCGGCGGTTC GCCGTGCCGC TCGCCCACCT 
CAAGCACCCG CTCTTCGGGG CGCTGCTCGA GGAGGCCGAG CGCGAGTACG 
GCTTCGCGCA GCGGGGCGCC ATCGCCATCC CCTGCCGCGT CGACCGCTTC 
GTCCACGTCG AGCACCTCAT CGTCCAGGAC CTCCACGGCG CCGCCGCCTC 
CCACCTCCTC GACCTCGACT CCTCCTCCCA CCACCACACC CAGATCCACC 
TCCACCTCCC CCGCTTCGCC GGTTGCTTCC GCGCCTGATC CTTCCATCAT 
CTCCATGGAT GCATCGCCAT GGCGGTGGAG CGGAGCTCCC AGATTGCTCT 
TCTTCTTCTT CTTCAGGGTT GGTTGGTCGA TTAATTACTT AGTTTAGCTA 
GTTTTTTGGT TTCCTTTTGC TTCGTCCTCC GATCTCTCGG TTTGTTGGGG 
ATGGATTTCG ATTGGGTTTG TGGACGGGAG AATCGGAGGA CGGATTCGAT 
GCTGATGACG ACGAAAAATT GAGATCGATC TCAAAAGTGT AAAGACAGAG 
TAATTCTTCT TAGTAGCTTT ATTCTAGTTT TATTTTTTTT ATCTTTTTTC 
TTTGCTTGTA CATCCACTTC TTGAAACACA TCAATAATAC AGTATACTTT 
GATCG

Gene models with high sequence identity

AT4G00880.1 [+] show detail - SAUR-like auxin-responsive protein family
E-value: 1e-17; Score: 87.40

InterPro Scan Digest

See the detailed result >

AT4G00880.1

Model type: Protein coding
Short Description: SAUR-like auxin-responsive protein family
Computational Description: SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G46690.1); Has 1421 Blast hits to 1407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1420; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR