K05341

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K05341

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K05341

Determination of introduced cDNA(s)

  • J023068M15 - Rice Full-length cDNAs - Original: J023068M15

    full reading [+] show sequence

    Nucleotide sequence: J023068M15 - full reading
    GGGATAGTCT CCTCCCTCCA CCACCACCAC CTCCTTCCAC GATCCCTCCC 
    CCTCTTGATC CCATCCGCCG CCGGAGGAGA TCTTGCCGTT CTTGCGCTTG
    GATCTAGACC GCAAGATCGG TGAACGGCGA CGCTCTCATT GGTTGGTTTA
    TTAGTTGGCT GGTTTCTCTC TCCTCGTCGA TTCTTCTCCG GCGAACACGC
    CGCCGCCGCC GCTTCGGATT CAAGGATCTT GCATTGCCTG TCTTTCCAAT
    TTCACATTGG ATTTACTCGA ACTGATTCGT GCTGAAACAA ATTTGACCAA
    GAAAAGAAGA GGAGGTCATC AGCAGGATGA AGAGGGTGTC GTCCCACGTC
    TCCATCGCCT CGGAGGCGGA GATCAACCTC GATCTCTCGC GGCTCCTCAT
    CGACAAGCCG AGGCTGACGC TGGAGAGGAA GAGGTCCTTC GACGAGCAGT
    CGTGGAGTGA GCTCTCCCAC CGCCAGAACG ACGGCTTCGA CAGCATCATG
    CACTCCCCGG CGTTCCCCTC GGGCTTCGAC TCGCCCTTCT CGCTGGGGAC
    GCTCGGTGAT CCCCACCCGC TCGTGAACGA GGCGTGGGAG GCTCTCAGGA
    AGTCCGTGGT GTACTTCCGG GGGCAGCCGG TTGGGACGAT TGCCGCCGTC
    GACCATGCGT CCGAGGAGGT GCTCAATTAT GATCAGGTTT TTGTGCGAGA
    TTTTTTTCCA AGTGCATTGG CTTTTCTAAT GAATAATGAG ACTGATATAG
    TGAAAAACTT CCTCTTGAAA ACACTCCACC TGCAAAGCTC GGAGAAAATG
    GTAGACCGTT TCAAGCTTGG AGCAGGAGCG ATGCCTGCAA GTTTCAAGGT
    GGATCGTAAT CGGAACAGAA ACACTGAAAC TTTAGTTGCA GATTTTGGTG
    AGAGTGCAAT TGGGAGGGTG GCTCCAGTGG ACTCTGGATT TTGGTGGATT
    ATTCTACTCC GGGCATATAC AAAGTATACG GCAGATACTA GTTTGGCAGA
    ATCACCAGAG TGTCAGAACT GCATGAGGCT GATACTGAAC CTATGCTTAT
    CTGAGGGATT TGATACCTTC CCAACTCTGC TCTGCACAGA TGGCTGCTCA
    ATGATGGATC GTCGAATGGG TATATATGGT TATCCTATTG AGATCCAAGC
    TCTATTCTAC ATGGCGTTGA GATGTGCTCT GCAGATGCTT AAGCCAGATG
    GTGAAGGGAA GGATTTCATA GAAAAGATAG GGCAACGGCT ACATGCTCTA
    ACCTACCACA TGAGGAATTA CTTCTGGCTA GATTTCCCAC ACCTGAATAA
    CATATACAGA TATAAAACAG AGGAGTATTC ACACACTGCT GTGAACAAAT
    TCAATGTCAT CCCGGATTCA ATCCCTGACT GGGTGTTTGA TTTCATGCCA
    TGCCGGGGAG GCTACTTCCT TGGCAACGTG AGCCCAGCTA TGATGGACTT
    TCGGTGGTTT GCCCTTGGAA ATTGCATTGC CATTATATCA TCTCTGGCTA
    CTCCAGAGCA ATCAGTGGCA ATAATGGATC TGATTGAGGA GCGGTGGGAA
    GAGCTAGTTG GTGAGATGCC TCTGAAGATA TGTTACCCTG CAATTGAGAA
    CCATGAATGG AGAATAATCA CTGGCTGCGA CCCGAAGAAC ACCCGGTGGA
    GTTATCACAA TGGAGGATCA TGGCCAGTTC TCCTGTGGCT GCTGACAGCA
    GCCTGCATCA AGACTGGGCG TCCGCAGATG GCGAAGCGCG CCATTGAGCT
    CGCCGAGTCC AGGCTACTGA AGGACGGCTG GCCAGAGTAC TACGATGGCA
    AGCTGGGACG GTTCATCGGC AAGCAGGCCA GGAAGTTCCA GACATGGTCC
    ATCGCTGGCT ACCTCGTAGC CCGTATGATG CTGGAGGACC CGTCGACGCT
    GATGATGATC TCCATGGAGG AAGACCGGCC GGTGAAGCCG ACCATGCGAC
    GGTCAGCATC ATGGAATGCC TGAAATGTTT TGATAGAATT TTTTTTTCCC
    AAAGAGAGGT TCAATGTGGA AACTTATAGG AGTTTTGTCC AAACATGAAA
    ATGGGGTTCA AAATTTACTG TAACTGTACT GTCAGTTAGG ACAGAAGTGT
    ATACGATAGA TCCAAGTCGT TTCAGAGCAA TTTTGTCCAA CTTTTCGTAT
    CTGGCTTCAT CAATCCAACA GAGAAGAAGT TTTTGTTGGT GAAACATTTT
    TGCAATAATT AAACAGTTTT GTCTTGACAT ATATACTAGC ATATGTTTCT
    GTGATGGATA ATTCTTTGTA ATACTTTGTA GGACTTTCTG TTAATATACT
    CCTCACATAT TTTCATTGTG G

    Gene models with high sequence identity

    1. AT4G09510.1 [+] show detail - cytosolic invertase 2
      E-value: 0; Score: 856.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Six-hairpin glycosidase-like 4e-29
    HMMPfam Plant neutral invertase 9.2e-238

    See the detailed result >

    AT4G09510.1

    Model type
    Protein coding
    Short Description
    cytosolic invertase 2
    Curator Summary
    CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues.
    Computational Description
    cytosolic invertase 2 (CINV2); FUNCTIONS IN: sucrose alpha-glucosidase activity, beta-fructofuranosidase activity; INVOLVED IN: sucrose catabolic process, using invertase or sucrose synthase, root development; LOCATED IN: cytosol; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Plant neutral invertase (InterPro:IPR006937), Six-hairpin glycosidase-like (InterPro:IPR008928); BEST Arabidopsis thaliana protein match is: cytosolic invertase 1 (TAIR:AT1G35580.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR