K05351

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K05351

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K05351

Determination of introduced cDNA(s)

J013155F11 - Rice Full-length cDNAs - Original: J013155F11

full reading [+] show sequence

GATTCCAACT CACTCTCGTC TCCTCTTCTT CTTCTTCAAC CTCTCCTTTC 
ATACATGCTG TTGCTGCCAC CACTACTGCT CTTCCTCGCC TCTTCCTGAT 
CTCAGCAGCC ATTTCCCTTT CCTGGGATCT CCTCCTCTTC TACTACTCTT 
CTTCCATCGC CATAAGAGCA GCCGCAGATC GATCGAATTG CATTGCAGTC 
TTTTGCAGAT TTCAGCTTAA TTGCCGGACA GTGAAGTGAA AGCATCTTCA 
AGGGCGTGGA AGCTCTCTGA GATTCCAAAG GGTCACAAGG CAGGGGATGA 
GTACAACCAA AGTGAAGAGA CGTGTGGGAA AGTATGAGCT AGGAAGAACA 
ATCGGAGAGG GCACATTCGC GAAGGTCAAG TTCGCGAGGG ATACCGAGAC 
CGGTGATCCA GTAGCCATCA AGATCCTAGA TAAGGAGAAA GTTCTCAAGC 
ATAAGATGGT CGAACAGATT AAAAGGGAAA TTTCGACAAT GAAGTTGATT 
AAGCACCCAA ATGTTGTCCG TATATATGAG GTGATGGGAA GCAAGACAAA 
AATCTACATT GTTTTAGAAT ATGTTACCGG TGGTGAGCTC TTTGATACAA 
TTGTTAACCA TGGTCGTATG AGGGAAGATG AGGCAAGAAG GTACTTCCAA 
CAATTAATTA ATGCTGTTGA TTATTGTCAT AGCAGGGGTG TGTACCACAG 
GGACTTAAAA CCAGAAAATT TACTACTAGA TTCATATGGG AATCTGAAGG 
TCTCTGATTT TGGGCTGAGT GCACTTTCTC AGCAAATTAA GGATGATGGT 
TTGCTGCACA CAACCTGCGG GACACCAAAT TATGTTGCAC CGGAGGTCCT 
TGAAGATCAA GGATATGATG GAGCAATGGC AGATTTGTGG TCATGTGGAG 
TTATCCTGTT CGTTCTGCTA GCAGGGTATT TGCCTTTTGA GGACTCTAAT 
CTTATGACGT TGTATAAGAA AATATCAAAT GCAGAGTTTA CGTTTCCACC 
TTGGACGTCT TTTCCTGCCA AGAGGTTGTT AACAAGAATC CTTGATCCAA 
ACCCAATGAC GGTATGCTAG AACAACTGAA TAACATAGTA GATAATTAGG 
TATAATGCAT CACTGAAGGC ACTGTAATGT GTCTTCTAAT AACACAGTAG 
ATCCTGTAAT GCCTGTAGCA TTCATCAACC AGATAATACT CAATTCTACA 
GGGGCTAGCA CTCCTTTTAG AAAGCTCTTC TATGCTTAAT AATAATCATT 
AAAACAGATA GTAATAACTA ATAAAATAAT ATCATCTTTC TTCGTGACAC 
AACATTGGAT GATTTCTTAA GCTAACTACT TGAGCTACTG TTGTAGAGAG 
TAACAATTCC AGAAATATTA GAGGATGAGT GGTTCAAAAA GGGCTACAAA 
CGCCCAGAGT TTGACGAAAA ATATGACACA ACATTGGATG ATGTTTATGC 
TGTCTTCAAT GACTCTGAAG AGCACCATGT GACAGAAAAG AAAGAAGAAC 
CAGAAGCTCT CAATGCATTT GAACTGATTT CAATGTCAGC AGGCCTCAAT 
CTTGGGAATT TGTTTGATTC AGAGCAGGAA TTCAAAAGAG AAACAAGGTT 
CACATCAAAA TGTCCACCAA AAGAAATTGT CCGCAAGATT GAGGAAGCCG 
CAAAACCTCT AGGATTTGAT GTTCAGAAGA AAAATTACAA GTTAAGGTTG 
GAAAAGGTAA AAGCAGGGAG AAAAGGAAAT CTCAATGTTG CTACTGAGAT 
ACTGCAGGTT GCACCCTCTC TTCATATGGT TGAAGTACGA AAAGCAAAAG 
GCGACACCCT CGAATTTCAT AAGTTCTACA AGAACCTCTC CAGAACCTTA 
AAGGATGTTG TTTGGAAATC AGATGATCTT CAAAATCAAC TTTCCTAGAG 
TAACTTGGGA GAGGAGGAAT GGGTGAACTA TTTTAGCATC CCATTCTTTT 
GAATCAGCAT TCCCATTTCT AGAGGCTGGA AAAGCAGAAA GCATGTTCAT 
TGCATCTGTA ATTAGATGTG AGTGGCCCTG TAAACTATGT TTGGTCTCCA 
CTAGTGTTGT AAATGCTGCT CTTATTTGTC AGAGAACCCT TGTGATAGCT 
CAAGTGAAGC TGATCACTCA ATGGGTTTTG TGTGTCAAGT TTTGTATGTA 
AATCAGAATC TTGTGAGGAA CAAGTATATT AATTGGCCAG CATTATTCAT 
TTTC

Gene models with high sequence identity

AT2G26980.5 [+] show detail - CBL-interacting protein kinase 3
E-value: 2e-125; Score: 446.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Serine/threonine-protein kinase-like domain	1.9e-69
HMMPfam	NAF domain	2.7e-26
HMMPanther	CBL-interacting protein kinase	5.7e-59
HMMPanther	Calcium/calmodulin-dependent protein kinase-like	5.7e-59
HMMPanther	CBL-interacting protein kinase	1.9e-155
HMMPanther	Calcium/calmodulin-dependent protein kinase-like	1.9e-155
HMMSmart	Serine/threonine-protein kinase domain	1.5e-92
HMMSmart	Tyrosine-protein kinase, catalytic domain	1.3e-10
ProfileScan	Protein kinase, catalytic domain	48.654
ProfileScan	NAF/FISL domain	13.026
PatternScan	Protein kinase, ATP binding site	0
PatternScan	Serine/threonine-protein kinase, active site	0
Gene3D	no description	4.1e-61
superfamily	Protein kinase-like domain	4.6e-85

See the detailed result >

AT2G26980.5

Model type: Protein coding
Short Description: CBL-interacting protein kinase 3
Curator Summary: encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers.
Computational Description: CBL-interacting protein kinase 3 (CIPK3); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: Ca2+regulated serine-threonine protein kinase family protein (TAIR:AT5G21326.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR