K05717

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K05717

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Original: K05717

Determination of introduced cDNA(s)

  • J033094B17 - Rice Full-length cDNAs - Original: J033094B17

    full reading [+] show sequence

    Nucleotide sequence: J033094B17 - full reading 
    GGTCGTCCAC GGTGCGCCGC CACCCCAAGC AAAGCAGTGG CGGTGGCGGC 
    GGCGCGGTGC CGAGCGCGGC CGGCGCCTCG GCGGGTGGGG GCGGGCGCCG 
    CTACCGGCGG TACGGCGCAC GTCGGCGGGC GAGAAAGCGC CGCTGGAGTG 
    CTGCTACTTA CTTGGCTGCG GCATGGCGGC GGGACCTTCG CTCCGTCGCG 
    GCGGCCGGCG GTTAGCCGCT CGGCTAATCC AAATCCGGCC GGGCAAAGCG 
    AGCACATTCT CCACTGCCTT AGGAGCAAAT TTCTTCACTG CGTCCCCGAC 
    AGTCAGGAAT ATCTTGTCTT CACCGATGAG ATCCGTGAAT TTCGCTGATC 
    GGAGCTTCAG GATCACAGCT GGCCCCGGAT TGGCTAGAAT CAGCTGAGGA 
    ATGCCAGGAA GGATGCTCCG ATCAATATCG TCTGCCAGTT CCACTGCAGC 
    AGCAACCAAG CTAGCATCAG TTGTACCCAA TACTGGTTTC CATCAAAGAA 
    TGATGAAGAA GCAATAAGTT CTTAAAGGAA TGATATTATT TTGTCCTACC 
    CCATGGTGAA CATTTCCCCA GACTGATTTC ATGACCGAGA TGATGTCAGT 
    CTTCTTGGTG AAGTTTGCAA TTCCAAGGAA GCCTTTAAGC TGCTGAAGGG 
    CAATGGTGAT GGCCGCTCCC GCCATGAATC CAACGATGGC AGCATGGGAC 
    AAGAACTCTA TGATAAACCC TAGCCTGCAG CAGAGTACAA TCTCACTCTA 
    TGGTAGCCAC TCACCTGAGG AATCCGAGCG CTGCCTGGGT GACCCCAGCG 
    AAGAACGTTG CAGTGAAGGC CAGCCGGGTG TACTCTTCCT GATTCTTCTT 
    GGGATCAAAC TCATTCTGGA GGAGAGTGCC AAGCAGCAGC GAAACGACGG 
    CCACTGGACC AATGGCTATA TCCCTGGAAC TTCCCATCAT CGCGTATATC 
    AAAGGCGGTA CGAAGCTGCT GTCTGAAAAA TCAGCAGATT TCCGTTAGAC 
    CACTGGCTGG ACTATCACTC GAGCACACCC TATACAAATA CTAGAGCTGT 
    GCTATTCAGG TCGCTGCTGT GCGTGCAAGA TGGTGTTTGA TCGTCAGGCA 
    CAAACCTGGG GTATGCAGAG GCTGGCAATG GTGAGGGAGA CGAGGTCGCC 
    CCTGAACTTG CGGAAGGTGT AGTGCCGGCC CCAGTCCAGC ACCGGGAAGA 
    AGTTTTGCAG GCTGATCAAC ACCTTCTTTG ACATCGGCTG GTCCTTGTAC 
    TGCCGCAACG GGTCGTCGGC GAAGAACGTC TCCTTCACGG CGTCGGTGAA 
    CTCGTCGATG AGCTTCTTCT TCGGTGGGAA CTCGACCTTG TGGCCGTGAT 
    GATGATGATG ATGGCCGCCG TCCATGTGGC TGTGCGATGA CGTCCGGCTG 
    GCGATGTCGG CGTCGATGGC CTCGCCCCCG TCGGACACGG CTCGCGGCAT 
    TGCCGGCGTT ATTCACCGGC AAGGTGCTGA AGGCGAACCT ATCTGCACAT 
    GAAGCGCAGT ACTGAAGCAG TACTGCCAAA GCACCTGCAT GCATCAACGC 
    ATGCATGGTC GACAGTGAAG AAAAAAAAAA CTTTTGCAGT ACGGAGAACC 
    AAAATATCTG AAACATTTGC ATTTACAACG CAGGGAAGAA ATCTATATGT 
    ATGTACTAGT ACTACTAACA AGAAGCAGC

    Gene models with high sequence identity

    1. AT1G78000.2 [+] show detail - sulfate transporter 1;2
      E-value: 3e-73; Score: 98.60

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Sulphate transporter 2.4e-22
    HMMPfam Sulphate transporter/antisigma-factor antagonist STAS 5.3e-05
    HMMPanther SULFATE TRANSPORTER 3.5e-05
    HMMPanther SULFATE TRANSPORTER 3.5e-05
    HMMPanther SULFATE TRANSPORTER 1.5e-28
    HMMPanther SULFATE TRANSPORTER 1.5e-28
    HMMPanther SULFATE TRANSPORTER 1.6e-21
    HMMPanther SULFATE TRANSPORTER 1.6e-21
    HMMPanther SULFATE TRANSPORTER 2.6e-21
    HMMPanther SULFATE TRANSPORTER 2.6e-21

    See the detailed result >

    AT1G78000.2

    Model type
    Protein coding
    Short Description
    sulfate transporter 1;2
    Curator Summary
    Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes.
    Computational Description
    sulfate transporter 1;2 (SULTR1;2); CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: sulfate transporter 1;3 (TAIR:AT1G22150.1); Has 10127 Blast hits to 10032 proteins in 1879 species: Archae - 35; Bacteria - 6193; Metazoa - 1167; Fungi - 451; Plants - 560; Viruses - 0; Other Eukaryotes - 1721 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR