K06202

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K06202

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Adult plant::Plant height::short)
rosette leaf (PO:0000014)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • desaturated green (PATO:0001272)
    (Rosette leaf::Color::pale)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K06202

Determination of introduced cDNA(s)

  • J033066F19 - Rice Full-length cDNAs - Original: J033066F19

    full reading [+] show sequence

    Nucleotide sequence: J033066F19 - full reading
    GTTCCTCTCG CCTCTCGCTC TCTCCGACGA AACCCCAAAA TTTTCTGAGG 
    GAAGCAAGCG GCGGCGCACG GAGTCCCCTC CCTCCCCAAT CTGCAACGAA
    CTCGAAGGGC GGCGGCGGCG GCGTACGCCG GTGAATCAGG TTCCCGCGGC
    GGAGCCGTGC TCCACCCCCG CGCTCCCATG AGCGATCTCC GCGAACTCGG
    CATGCGGCGG GAGCCGTCGA GGGCTGAGGT GGTGGGGCGT GCCAAGGACG
    ACGGGGACTT CGACGCGCTC CGCCGCGCCA TCATCCGCAA GGTCAAGGAC
    AACGAGGTGC TACGCAGCAA CATAATTGCA GAGGTGAAGC AGTCAGTGGT
    AATAAATGAA GATGGCTCTG AAAAGTTAAA GCTGAAAGAT CTTTCTGATG
    CGATTTACCA AGATATCGGG AGCAAAATAA TGGGTCAAAT CTCAGACGAG
    ATATGGGGTG TCATCCTATC AAATGAAATT GATATCCGAG GAACTTCTGA
    AACTGTCTAC AATAGAATGA TGAACCCTGA GCAGCAGCAG GACCCTCCTT
    CAAAGAAACT GAAGAGGAAT GCCAAAGAGG AGCAAGTGTC CCCAGCAAAA
    GCATCAACTT CTGTTGCAGT CCAGCTGGAA GATGATGATC CAGAGGAACC
    ACCAGGATTT GGTTTCAGTG ATCATCAGCG CAGCAACATC ATGGCAACTC
    AGCAGCAGCA GTCGTCAAAT ACTGAGAATC ATAACCAAGT GAAACCAAAT
    GAAGGTGAGC CCAACGCCGT TAGCTGCCCT GGGGATGATG ATGAGGAGGA
    TCCTGATGTG CCTCCTGGGT TTGGTTAACA TCCTGCAATC TTCTATTGTG
    GTGTGATCTG TGATGTTTCT TGTCAACACT AAGAAAAATG ATTTAGTTTA
    CATTTGCTGC TCGAGGGGTT CATTTGAATA TTGAATCATG AAACCGATAT
    GATTGGGATG AGTTCATGTT GCTCCTAGCT TCAGCCTCTT ATTTATGAGG
    GAACAAATGG GCATTTAAGC GATC

    Gene models with high sequence identity

    1. AT1G12530.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56420.1); ...
      E-value: 5e-26; Score: 115.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G12530.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56420.1); Has 54 Blast hits to 53 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR