K06212

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K06212

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K06212

Determination of introduced cDNA(s)

  • J013060K17 - Rice Full-length cDNAs - Original: J013060K17

    full reading [+] show sequence

    Nucleotide sequence: J013060K17 - full reading 
    GATGCCGCTT GGTTACTCGC ATACACACAC TGGCGCGCGC GCGAAATCGA 
    TAATTCTGCG ATGGATTTGG TCGCGGGAGG AGTGATTCGC GGACTCCCGT 
    CATCCTGGGA ACGCATCAGA TCGCCGAGGA CTCCGCTCTT TCTCAGTTCT 
    TGGGCTTCTC GCCGCCGCGT TGCTTTTGCG GCGTGCTCGT CATGCCCGCT 
    GGTTGTTTGT CGAAATGCCT CAGCGGTGGT GCCGTTCGCC AAGAAAAAAA 
    GGAAGGGGGG AAGTGAGGAG CCGCCTGATG AGGAGGAGGG TGATGATTTT 
    GTTGATGAGA TGGAGGGTGA AGACGATGAT GATGAGGAGG AGGAGGATGT 
    TGATGATGAT GATCTATTGG ATGATAACGA GGATGATGAT GATGACTATT 
    CTTTTGAAGA TGATTTTGAG AGTGATGATG AACAAGATCT TTATGTTGGG 
    GATGGAGGTG CTGGTGGCGG AATATCACTT GCTGGCACAT GGTGGGATAA 
    GGAAGCATTG GCTTTGGCAG AGGAGGTCTC AAATTCATTT GATGGAGACT 
    TAAAAATTTA TGCTTTCAAG ACAGCTGCTA ATTTAACCAT CAGAGTACGC 
    ATTGAGAAGA TGTCAACCAG GTATGGTTCT CCAACCATAG ATGATATCGA 
    AGCGTTCACA ATTGCATACC GTGCAAAGAT TGATGATGCA GAGTCAGCAG 
    GCAGGATACC ACAAAACATA TCCTTGGAGG TGTCATCCCC TGGTGTGGAG 
    AGGGTTATCC GCATCCCTGA TGATCTTGAA CGCTTCAAAG AACGGGCCAT 
    GTATGTCAGG TACACCATTA CAAGCGACGG CGGAGAAGGG ATGACGCCTC 
    AGGAAGGCGA TGGAGTTTTC AGGCTCATCT CCTACGACAT GGACCTGTGC 
    GAGTGCACCT GGGGTATAGC TGATGTGAAG ATCAACAGGC AGCAGGCCGG 
    CAAGGGAAGG CCCCTGAGCA AGAAGCAGAG GGAGTGGCGG CTGCAGACGC 
    CATTTGAGTC ACTGAAGTTG GTCAGGGTGC ATTCTGACTG CTGACTGATC 
    AGATGCCTCT TTTGAGTAAA TTTTTGTAGC CATCTGTTGT AATTTTGTAT 
    CATAGGTAAA AGGTGCTCTG CCATTGTGTG TGTGCAGTAG CTATATCTGA 
    AAAAACGTTT GTTATAGCAA GTGCCAACAC CCAACAGTTA CATTCAGTGA 
    TCGACGAGAT GAGTTTTTCT CCTC

    Gene models with high sequence identity

    1. AT1G77122.1 [+] show detail - Uncharacterised protein family UPF0090
      E-value: 3e-68; Score: 256.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G77122.1

    Model type
    Protein coding
    Short Description
    Uncharacterised protein family UPF0090
    Computational Description
    Uncharacterised protein family UPF0090; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0090 (InterPro:IPR003728); BEST Arabidopsis thaliana protein match is: Uncharacterised protein family UPF0090 (TAIR:AT1G69210.1); Has 3296 Blast hits to 1357 proteins in 179 species: Archae - 2; Bacteria - 148; Metazoa - 1652; Fungi - 253; Plants - 200; Viruses - 109; Other Eukaryotes - 932 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR