K06302

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K06302

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K06302

Determination of introduced cDNA(s)

  • J023006K06 - Rice Full-length cDNAs - Original: J023006K06

    full reading [+] show sequence

    Nucleotide sequence: J023006K06 - full reading 
    GAGATAGCGC ACGCCACCTC CCCTCCCCTC CCCTCCCATG GCAACGCCAC 
    CACCGCCACC GCCTTCGCCT CGTCGCCTCC GCCGCTAGCC GTTACCCCCC 
    CACCACCGGC GCCCCCTCAC CTTCTCCCCA ATGTCGACGG CGGCGCCCGC 
    ATCCGCTACG GCGGCTGCGA GCCTCTTCCT CCGCCGGAGT CTCTCCTCCT 
    CCTCCCCTCG CCACGTCTTC CTGCCTCATT GGGTTGCCCC CATTGTCGTC 
    GCGCGCCCCG CTAGGTTATC TGCGGTGCCG GCGAAGCGCG GTGGAGGTGG 
    TGTTGTTGCG GCTGCATCGG CGGCGGCGGG GAGCGCGCAG TTTGGCGCCG 
    GGGACAGTGA GAATCCATAC GAGATTTTGG GGATCAGTCC ACTTGATGGG 
    TTCGACCAGG TGAAGATGGC CTATAAGCGG AGGCGAAAGG ATGCCGAGAG 
    CAACAAAGAT GCCGAGCACC TGTTCAAGTT AGAGAGGGCA TACGATATGG 
    TCATGATGGA GCAGCTTCAG AACCGGAAGA ATGGGGTGGC ATATGGATCA 
    ATCCAGGTGT CAAAGGACAT TAAATAATGC TGATAATCAA CCAGTGGTTC 
    CTTGGGGGCC TAGATACTCA AGATCCACTG GGAAGGACCT GCGCATTAAT 
    ATGGCAATAT CAGCAACATT TATCATGTAT ATATCTACCA TGGGCCATGC 
    AGACTGGAAG CCCATGCAGT TTTTGTGTTT TGCCTATTTC TATCGAATAC 
    TTGACAAACT GAAGGCTACC GAGTCAGCTA GCACTCCTAT ATACAATGAG 
    TATGGTGAGG TTGAAGGTCG TGGCATACAC ATGGCAAAAC GAGTACTCCG 
    TAGTTTGGGT TTGGTACTTG GATCAATACT TGCTGTATCC CTGGGCTACA 
    CTGGGCTAGC CAATTTTTCT CAGTTTCTTG GGCAGTATAT TCCATCTGTT 
    GTTTATAACT TCCAGGAATT GATTGTGACT ACAGCTTCAT CTGTTTTGCT 
    TTGCATATTG GCGTCGTACT ATCGATAGCA ACTTGTGTAA TTGTGTTGGA 
    TCACCCCTTG GCATTGCAAT CTTGATAAAC CTGTCTTCAT GAGGGCCATG 
    GTCGATAACT TGAGCCTATT CTGCTATGGA ATATGAGAGC CCATCAACTA 
    TATAAGTGCA CTGTTCTTGC ATGTTTTACA TCGTTCTTAC ATCTGGAAAA 
    TTTTGCAGCT ACTGATAAGA TGTTCTATCC AATGTTTTGA AACTGAAATT 
    TAGCATGCAA GAGACAGACA GCTAACAAAG CAATGTGTCA CATGAAACCT 
    GACGATGCTG AAAATCTAGT TCTAGTGAGT TGTTCCAGCA AAAAGTTAAC 
    TGCAATTTTC CTAGAAGTTT CCTTGAGTTT GCAATCTGCT TGCAAGTTCC 
    TTGTATATTT ACTGAACAAT TACTCTGTGT TGGTGAGTTA TGAATTACAA 
    CGTCCTTATG G

    Gene models with high sequence identity

    1. AT1G08640.1 [+] show detail - Chloroplast J-like domain 1
      E-value: 5e-62; Score: 85.50

     

    InterPro Scan Digest

    See the detailed result >

    AT1G08640.1

    Model type
    Protein coding
    Short Description
    Chloroplast J-like domain 1
    Computational Description
    Chloroplast J-like domain 1 (CJD1); LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 82 Blast hits to 80 proteins in 30 species: Archae - 0; Bacteria - 24; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR